DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG31618 and His2A:CG33838

DIOPT Version :10

Sequence 1:NP_724343.1 Gene:His2A:CG31618 / 318855 FlyBaseID:FBgn0051618 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001027341.1 Gene:His2A:CG33838 / 3772618 FlyBaseID:FBgn0053838 Length:124 Species:Drosophila melanogaster


Alignment Length:204 Identity:36/204 - (17%)
Similarity:66/204 - (32%) Gaps:81/204 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LRRTSSSYGIKTDNGIIRWPERGYGSHLSLKI-YVYDENEIDGLKELLYGRDGSVKTTACLKGQW 123
            :||......::..|.:||          :.|: |:::...:..||.              .:|..
  Fly   192 MRRRQQRAKLEAQNKLIR----------ARKVPYLHESRHVHALKR--------------PRGSG 232

  Fly   124 GSQVKIHKLLLESKFRTIKKDEADLFFVPAYVKCVRMLGGLNDKEINQTYVKVLSQMPYFRRSGG 188
            |..:...|||.||:....::.|.|            .||    :::|:.     :.|..|.    
  Fly   233 GRFLNTKKLLQESEQAAAREQEQD------------KLG----QQVNRK-----TNMSRFE---- 272

  Fly   189 RDHIFVFPSGAGAHLFRSWSTFINRSIILTPEADRTDKKDTTAFNSWKDII---------IPGNV 244
                        ||:.::     |:.     .:..|...|.|:.:...||.         .|..:
  Fly   273 ------------AHMLQN-----NKD-----RSSTTSGSDITSVSDGADIFGHTEFQFSGFPTPI 315

  Fly   245 DDAMTKNGQ 253
            :.||..:||
  Fly   316 NRAMLVHGQ 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG31618NP_724343.1 PTZ00017 16..124 CDD:185399 10/64 (16%)
His2A:CG33838NP_001027341.1 PTZ00017 16..124 CDD:185399
Blue background indicates that the domain is not in the aligned region.

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