DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG31618 and H2ab1

DIOPT Version :10

Sequence 1:NP_724343.1 Gene:His2A:CG31618 / 318855 FlyBaseID:FBgn0051618 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001096135.1 Gene:H2ab1 / 100039319 MGIID:3642445 Length:115 Species:Mus musculus


Alignment Length:284 Identity:57/284 - (20%)
Similarity:93/284 - (32%) Gaps:102/284 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 PSGAGAHLFRSWST---------FINRSIILTPEADRTDKKDTTAFNSWKDIIIPGNVDDAMTK- 250
            ||.:..|:...|.|         :.||               ||...:||.   |.:.|:.::: 
Mouse   261 PSTSPLHVLGDWETHKDTSGRNFYFNR---------------TTQERTWKP---PRSRDNGVSRG 307

  Fly   251 --NGQPDVQPLPLSKRKYLANYLGRAQGKAGRLKLIDLSKQFPDKLECPDLKFSGTEKFGRTTYF 313
              :...|::||. |:....:.:..::..:.|.          |.:....:|     ::.|.|.|.
Mouse   308 DTSNTGDMEPLS-SEENCPSTHSSQSDSQYGS----------PPRGWSEEL-----DEHGHTLYV 356

  Fly   314 EHLRNAK------------FCLAPRGESSWTLRFYESFFVECVPVLLSDHAELPFQNVIDYAQ-- 364
            ....|.|            :..|....|.|.|..|..    ..|:    ..|.|..:.::..|  
Mouse   357 SEYTNEKWIKHVDEQGRPYYYSADGSRSEWELPKYNL----SPPI----SGEAPKSHSLERKQQE 413

  Fly   365 --VSIKWPSTRIGSEFLDYLASISDRDIEGMIARGRKIRCLFVYGPDSAPC-SAVK--------- 417
              |..||..:       .|:..|||:  |.:.|:..        .|:|..| |:.|         
Mouse   414 PIVLTKWRHS-------TYVLDISDK--ESVNAKPN--------SPESDSCPSSPKHPSTPSEKC 461

  Fly   418 GIL-----WELQRKVRHFQQSTET 436
            |:|     .|..:|||....||.|
Mouse   462 GVLNVTKITEHGKKVRKNWASTWT 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG31618NP_724343.1 PTZ00017 16..124 CDD:185399
H2ab1NP_001096135.1 H2A 25..112 CDD:197711
Blue background indicates that the domain is not in the aligned region.

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