DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG31617 and h1-0

DIOPT Version :10

Sequence 1:NP_724341.1 Gene:His1:CG31617 / 318854 FlyBaseID:FBgn0051617 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_998836.1 Gene:h1-0 / 407939 XenbaseID:XB-GENE-480028 Length:196 Species:Xenopus tropicalis


Alignment Length:230 Identity:91/230 - (39%)
Similarity:116/230 - (50%) Gaps:46/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGGSSLLAIKKYITAT 78
            ||.||...|:   .|||       |||:   .||....|:.|:::..|.|.|||..:|:|||...
 Frog     6 AAAPAGKPKR---SKAS-------KKAT---DHPKYSDMILAAVQAEKSRSGSSRQSIQKYIKNH 57

  Fly    79 YK----CDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKK 139
            ||    .|:|     ||..:|..|.:|.|.||||.||||||:| |.|.:.|.|..|.|     |:
 Frog    58 YKVGENADSQ-----IKLSIKRLVTSGTLKQTKGVGASGSFRL-AKADEGKKPAKKPK-----KE 111

  Fly   140 VQSKKVASKKIGVSSKKTAVGAAD-KKPKAKKAVATKKTAENKKTEKAKA-KDAKKTGIIKSKPA 202
            :  ||.||.|.....||.|...|. ||||    ||.||..:..|.:.|.: |.||||..:|:|| 
 Frog   112 I--KKAASPKKAAKPKKAAKSPAKAKKPK----VAEKKVKKPAKKKPAPSPKKAKKTKTVKAKP- 169

  Fly   203 ATKAKVTAAKPKAVVAKASKAKPAVSAKPKKTVKK 237
                 |.|::    |.||..:||...|.|||:.:|
 Frog   170 -----VRASR----VKKAKPSKPKAKASPKKSGRK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG31617NP_724341.1 H15 43..130 CDD:238028 38/90 (42%)
h1-0NP_998836.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 13/35 (37%)
Linker_histone 25..93 CDD:459846 31/72 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..196 59/140 (42%)

Return to query results.
Submit another query.