DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG31617 and LOC101730918

DIOPT Version :10

Sequence 1:NP_724341.1 Gene:His1:CG31617 / 318854 FlyBaseID:FBgn0051617 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004919170.1 Gene:LOC101730918 / 101730918 XenbaseID:XB-GENE-29084935 Length:229 Species:Xenopus tropicalis


Alignment Length:242 Identity:99/242 - (40%)
Similarity:126/242 - (52%) Gaps:32/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|..|:.:|..|.||..:||..:|     .|.||||    |:.|...:::..::...|||.|
 Frog     1 MTETAAETAPAPPPAEPAAAKKKQPKK-----GGAKAKK----PAGPSAAELIVKAVSASKERSG 56

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:....:.|:..|
 Frog    57 VSLAALKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 119

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKK-TAVGAADKKPK-----AKKAVATK--KTAENKKTEKA 186
            |.|  .|..||:....|:||...|.|| ..|.||.|.||     ||.|.:.|  |.|:.||..|:
 Frog   120 KKK--PAAPKVKKPAAAAKKAPKSPKKPKKVSAAAKSPKKVKKPAKAAKSPKKPKAAKPKKVAKS 182

  Fly   187 KAKDAKKTGIIKS------KPAATK--AKVTAAKPKAVVAKASKAKP 225
            .||.|.|....||      ||.|||  ||..||||||  |||.||.|
 Frog   183 PAKKAAKPKAAKSPAKKPTKPKATKSPAKAKAAKPKA--AKAKKAAP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG31617NP_724341.1 H15 43..130 CDD:238028 32/87 (37%)
LOC101730918XP_004919170.1 H15 39..111 CDD:238028 29/73 (40%)

Return to query results.
Submit another query.