DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His1:CG31617 and LOC100496496

DIOPT Version :9

Sequence 1:NP_724341.1 Gene:His1:CG31617 / 318854 FlyBaseID:FBgn0051617 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002941384.1 Gene:LOC100496496 / 100496496 -ID:- Length:223 Species:Xenopus tropicalis


Alignment Length:238 Identity:95/238 - (39%)
Similarity:125/238 - (52%) Gaps:30/238 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|..|:.:|..|.||..:||..:|.|:|  |.||||    ||.|...:::..::...|||.|
 Frog     1 MTETATETAPAPPPAEPAAAKKKQPKKAAAG--GAKAKK----PSGPSAAELIVKAVSASKERSG 59

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLS---------AS 120
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:         |:
 Frog    60 VSLAALKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 122

  Fly   121 AKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEK 185
            .||...||||....:|:|..:|.| ..||:    ||.|..|  |.||..||...||.|::...:.
 Frog   123 KKKPAAPKAKKPAAAAKKAPKSPK-KPKKV----KKPAKAA--KSPKQPKAAKPKKVAKSPAKKA 180

  Fly   186 AKAKDAKKTGIIKSKPAATKA---KVTAAKPKAVVAKASKAKP 225
            ||.|.||......:||.|.|:   |..||.|||  |||.||.|
 Frog   181 AKPKAAKSPAKKAAKPKAAKSPAKKAKAANPKA--AKAKKAAP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG31617NP_724341.1 Linker_histone 46..118 CDD:278939 29/72 (40%)
LOC100496496XP_002941384.1 Linker_histone 41..111 CDD:366156 29/71 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.