DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG31617 and LOC100495663

DIOPT Version :9

Sequence 1:NP_724341.1 Gene:His1:CG31617 / 318854 FlyBaseID:FBgn0051617 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002942341.3 Gene:LOC100495663 / 100495663 -ID:- Length:228 Species:Xenopus tropicalis


Alignment Length:251 Identity:102/251 - (40%)
Similarity:133/251 - (52%) Gaps:28/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|....|.|.|.|.|  :||...|||:|:  ||:||    ||.|...:::..::...|||.|
 Frog     1 MAEAAETAPAPPPAEPAA--KKKKQSKKAAGA--TKSKK----PSGPSVSELIVKAVSASKERSG 57

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLSASAKKEKDPKA 129
            .||.|:||.:.| .|  :.:|....:|..||..|....|:|.||.||||||||:   ||:...|.
 Frog    58 VSLAALKKALAAGGY--NVEKNNSRLKLALKGLVSKETLVQVKGSGASGSFKLN---KKQLQSKE 117

  Fly   130 KSKVLSAEKKVQSKKVASKKIGVSSKK-TAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKK 193
            |    :|....::||.|:||...|.|| ..|.||.|.|  ||.|  ||.|:..|:.|..||.|.|
 Frog   118 K----AAPAAAKAKKPAAKKAAKSPKKPKKVSAAAKSP--KKVV--KKAAKAAKSPKKVAKKAAK 174

  Fly   194 TGIIKSKPAATKAKVTAAKP--KAVVAKASKA-KPAVSAKPKKTVKKASVSATAKK 246
            ......||.|.|||..|..|  |:|..||:|: ..|.:||||  |.||..:|..||
 Frog   175 AAKSPIKPKAAKAKKVAKSPAKKSVKPKAAKSPAKAKAAKPK--VAKAKKAAPKKK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG31617NP_724341.1 Linker_histone 46..118 CDD:278939 28/72 (39%)
LOC100495663XP_002942341.3 Linker_histone 39..109 CDD:395429 28/71 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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