DRSC/TRiP Functional Genomics Resources

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Protein Alignment His1:CG31617 and h1-6

DIOPT Version :10

Sequence 1:NP_724341.1 Gene:His1:CG31617 / 318854 FlyBaseID:FBgn0051617 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004913862.2 Gene:h1-6 / 100488538 XenbaseID:XB-GENE-5761117 Length:227 Species:Xenopus tropicalis


Alignment Length:240 Identity:93/240 - (38%)
Similarity:125/240 - (52%) Gaps:30/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQQMVDASIKNLKERGG 65
            |:::|..|:.:|..|.||..:||..:|     .|.||||    |:.|...:::..::...|||.|
 Frog     1 MTETAAETAPAPPPAEPAAAKKKQPKK-----GGAKAKK----PAGPSAAELIVKAVSASKERSG 56

  Fly    66 SSLLAIKKYITA-TYKCDAQKLAPFIKKYLKSAVVNGKLIQTKGKGASGSFKLS---------AS 120
            .||.|:||.:.| .|  |.::....:|..||:.|..|.|.|.||.||||||||:         |:
 Frog    57 VSLAALKKALAAGGY--DVERNNSRLKLALKALVTKGTLTQVKGSGASGSFKLNKKPLESKEKAA 119

  Fly   121 AKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSK-----KTAVGAADKKPKAKKAVATKKTAEN 180
            .||...||||....:|:|..:|.| ..||:..::|     |....|| |.||..||...||.|::
 Frog   120 KKKPAAPKAKKPAAAAKKAPKSPK-KPKKVSAAAKSPKKVKKPAKAA-KSPKKSKAAKPKKVAKS 182

  Fly   181 KKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAVVAKASKAKP 225
            ...:.||.|.||......:||.|||:...||||||  |||.||.|
 Frog   183 PAKKAAKPKAAKSPAKKPTKPKATKSPAKAAKPKA--AKAKKAAP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His1:CG31617NP_724341.1 H15 43..130 CDD:238028 36/96 (38%)
h1-6XP_004913862.2 H15 39..111 CDD:238028 29/73 (40%)

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