DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG43394 and Mansc1

DIOPT Version :9

Sequence 1:	NP_001245938.1	Gene:	CG43394 / 318843	FlyBaseID:	FBgn0263256	Length:	948	Species:	Drosophila melanogaster
Sequence 2:	NP_001103073.1	Gene:	Mansc1 / 690606	RGDID:	1593458	Length:	419	Species:	Rattus norvegicus

Alignment Length:	244	Identity:	49/244 - (20%)
Similarity:	76/244 - (31%)	Gaps:	88/244 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly   172 YIEEDATKSVDEEPPADQFYRVEQHEPIPQAQVQQLPSRDKPKPFEYSSEDDYYDEHAEAKTTTT 236
            ||:.|   ....:||:   |..:.|     :|..||||             :....|...||
  Rat   184 YIQVD---DASTQPPS---YEGKNH-----SQSLQLPS-------------ELNMVHLLPKT--- 221

  Fly   237 STSTTQAPLPILRARFGGFPWATTQAPS--PPTTSSTSSTTTTSTTTTTTTTSTTTTPSPRKQPK 299
                  .|.|.:..|  |...:.|..|:  ..:.|.|..|:.....||....:|.|:.||.
  Rat   222 ------PPFPTVAPR--GSNVSATLKPALLLASISVTPKTSRPKDATTVPHVTTVTSESPA---- 274

  Fly   300 HIQVTGGLKPELLPADQLRNYIKDVYIRMPLAVIVDPSSASLEQAKRLYIDALQDKNIDIKIVLV 364
             :.|:.|..|                       :|.|.:|         :..:...:.|.|.:..
  Rat   275 -VPVSTGFIP-----------------------VVSPQAA---------LTTILQAHTDSKGIFK 306

  Fly   365 TLNAAGA------------PSAFSFNNTREFIAGLNSTKEHEGGNSFVG 401
            |:...|.            |:|.|.:.:...:  :|.|...|.|...||
  Rat   307 TVPFRGGSKLTSDTRHGKRPAATSLSTSESSV--INKTAPWENGRISVG 353

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG43394	NP_001245938.1	None
Mansc1	NP_001103073.1	MANEC	23..116	CDD:129004
Mansc1	NP_001103073.1	AmyAc_family	<164..236	CDD:298606	19/86 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR16021
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100