DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bsg and vstm2l

DIOPT Version :10

Sequence 1:NP_723346.2 Gene:Bsg / 318841 FlyBaseID:FBgn0261822 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001016985.1 Gene:vstm2l / 549739 XenbaseID:XB-GENE-1014736 Length:199 Species:Xenopus tropicalis


Alignment Length:183 Identity:38/183 - (20%)
Similarity:61/183 - (33%) Gaps:72/183 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 VPSNTAVVEGEKMSVTCSVVGT-----KPELTW-------------TFANVTLTN--------AT 537
            :|.:.:...||.:.:.||..|:     ..|:.|             |:|...|.:        ||
 Frog    42 IPHDVSAHPGEDVEMACSFRGSGDIPYSLEIQWWYMRSHRDWANKETWAENQLKSLPGNPEKGAT 106

  Fly   538 DRFILKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRV------KG 596
            ...|:|...:.:.:. |.|.:|.:.|.|.|:|                       ||      ||
 Frog   107 KISIVKVFGSNISHK-LRLSSVKISDEGTYEC-----------------------RVLDYSDGKG 147

  Fly   597 KFAALWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQ-----EQKKKR 644
            :...:..||.:.:||           .||......:.||.|.     ::.|||
 Frog   148 RQHRVKAFLRVESEV-----------GRRGVISHRQQDTGPHRHFPGKELKKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BsgNP_723346.2 Ig 423..481 CDD:472250
Ig strand B 423..426 CDD:409353
Ig strand C 436..440 CDD:409353
Ig strand E 463..467 CDD:409353
Ig strand F 477..481 CDD:409353
Ig_3 495..573 CDD:464046 22/99 (22%)
vstm2lNP_001016985.1 IG_like 43..143 CDD:214653 24/123 (20%)
Ig strand B 54..58 CDD:409353 0/3 (0%)
Ig strand C 72..76 CDD:409353 1/3 (33%)
Ig strand E 118..124 CDD:409353 1/6 (17%)
Ig strand F 134..139 CDD:409353 2/27 (7%)
Blue background indicates that the domain is not in the aligned region.

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