DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bsg and Dscaml1

DIOPT Version :9

Sequence 1:NP_723346.2 Gene:Bsg / 318841 FlyBaseID:FBgn0261822 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:623 Identity:120/623 - (19%)
Similarity:209/623 - (33%) Gaps:169/623 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LGQPFSITCIIPITDQ--IHWLKNGEPITRHNLRHGRDDHAYVLSESAIEGEKHKIEA----HLS 108
            :|....::|.:..:.:  |.|.:|                    :|..:.||...|..    .|.
Mouse   328 IGSTVILSCALTGSPEFTIRWYRN--------------------TELVLPGEAISIRGLSNETLL 372

  Fly   109 VRHALKVHEGRYQCNRRRGS--------YILHVRDPKGVGAGAGEPTESGYQTIDELTPNSADDF 165
            :..|.|.|.|.|||...|.:        .:|....|:.|            .:..|...|..:.|
Mouse   373 ISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIV------------SSFSEKVVNPGEQF 425

  Fly   166 F-----------TRAW-LEQQQQQQQLPHQSHKLHKSHLGYGNASLSGSQPWHPSAGGGGIHRV- 217
            .           |..| |:.:...:...|::::...|    ...::|......|....||::|. 
Mouse   426 SLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMS----DGTTISHMNVTGPQIRDGGVYRCT 486

  Fly   218 ---------YSATPPDFPPPRLNLLEQTVAPPEPPTILYNPNPTHPTASATATETSVLLTTAHHH 273
                     |.|......||.:..:....|.....|::......:|..|....:.::||...|..
Mouse   487 ARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQ 551

  Fly   274 AHH-------------------------QQQLQ-QQSQHTLNAFQLPLPPRPNPGQNERYQTYAP 312
            ...                         |.||. .||.|.    .:.:||...|.:      :.|
Mouse   552 VVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHV----AVKVPPLIQPFE------FPP 606

  Fly   313 H------YVPPVVVSG--------AGAGAGADPGAGASGE-QTTISAATSTRAMMGGGGGVAGAG 362
            .      |:|.||.||        ...|.....|:|.:.| :..:|:...:...:...|......
Mouse   607 ASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIA 671

  Fly   363 FSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMDKLV-PNYDNAEHQMKFYDIRSPLVLSC 426
            .:|.|:                  |..:.|.::.|....:| ||     :|...|....  ||:|
Mouse   672 SNAAAT------------------VSRERQLIVRVPPRFVVQPN-----NQDGIYGKAG--VLNC 711

  Fly   427 NVKDGTPGGVLIWKK-----NGTAVTDVPSLRGRFKLIADENKFIIDKTDTNDDGKYSCE-FDGV 485
            :| ||.|...::||.     |......|| |.||.:::.: :..:|......|.|.|.|: .:||
Mouse   712 SV-DGYPPPKVMWKHAKGSGNPQQYHPVP-LTGRIQILPN-SSLLIRHVLEEDIGYYLCQASNGV 773

  Fly   486 SKEIEVIARVVVRVPS------NTAV-VEGEKMSVTCSVVGTKP-ELTWTFANVTL-TNATDRFI 541
            ..:|.....:.|::|:      ||.: ::|....:.|:..|.:| .:.|...:..: .:...|:.
Mouse   774 GTDISKAMFLTVKIPAMITSHPNTTIAIKGHPKELNCTARGERPIIIRWEKGDTVIDPDRVMRYA 838

  Fly   542 LKPDDNGVPNAILTLDNVTLDDRGEYKCIGRNAANVYG 579
            :...|||  :.:::...:...|||:......:|.|.||
Mouse   839 IATKDNG--DEVVSTLKLKPADRGDSVFFSCHAINSYG 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BsgNP_723346.2 IG_like 420..497 CDD:214653 23/82 (28%)
Ig 423..497 CDD:299845 23/79 (29%)
IG_like 500..583 CDD:214653 19/89 (21%)
Ig 512..575 CDD:143165 11/64 (17%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005 17/80 (21%)
Ig 408..498 CDD:353325 16/105 (15%)
IGc2 519..577 CDD:197706 6/57 (11%)
Ig 615..681 CDD:319273 14/83 (17%)
Ig_DSCAM 707..785 CDD:143211 23/82 (28%)
Ig 803..891 CDD:353325 16/74 (22%)
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.