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Protein Alignment Bsg and hmcn2

DIOPT Version :9

Sequence 1:	NP_723346.2	Gene:	Bsg / 318841	FlyBaseID:	FBgn0261822	Length:	648	Species:	Drosophila melanogaster
Sequence 2:	XP_031747766.1	Gene:	hmcn2 / 100490941	XenbaseID:	XB-GENE-6034990	Length:	4625	Species:	Xenopus tropicalis

Alignment Length:	650	Identity:	132/650 - (20%)
Similarity:	210/650 - (32%)	Gaps:	200/650 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    39 PTIYYGD----PVVNLGQPFSITCI---IPITDQIHWLKNGEPITRHNLRHGRDDHAYVLSESAI 96
            |.:..|:    ..|....|..::|.   .| |..|.||:|     .|:|.|  :|...||:...:
Frog  1707 PKVVIGEGSEHVTVTANDPLDLSCHATGYP-TPTIQWLRN-----NHSLSH--EDGVEVLNGGKM 1763

  Fly    97 EGEKHKIEAHLSVRHALKVHEGRYQCNRRRGSYILHVRDPKGVGAGAGEPTESGYQTIDELTPNS 161
                      |::|.....|.|:|:|.....|             |..|
Frog  1764 ----------LTIRQIQPEHAGKYKCKAEGDS-------------GTAE---------------- 1789

  Fly   162 ADDFFTRAWLEQQQQQQQLPHQS---------HKLHKSHLGYGNASLSGSQP-----WHPS---- 208
                   ||:|  .:.|:||..:         :.|.:..|   ...:|||.|     |...
Frog  1790 -------AWVE--VEVQELPSVTIAGGTTMVVNFLKRVVL---ECDVSGSPPPSVTWWKDGFLLP 1842

  Fly   209 --------------------------AGGGGIHRVYSA-TPPDFPPPRLNLLEQTVAPPEPPTI- 245
                                      ||.|....|.:. ..|:..|..:|   |||....|.:.
Frog  1843 VQGPKLQIDSVSIDDEGVYTCVATNFAGEGRQDVVLTVLVSPNIEPSDVN---QTVIENLPASFE 1904

  Fly   246 -LYNPNPTHPTASATATETSVLLTTAHHHAHHQQQLQQQSQHTLNAFQLPLPPRPNPGQNERYQT 309
             |.:.:|. |..|....|..:.........:..:.||.:|..:.::.:.........|..|....
Frog  1905 CLASGSPL-PLVSWYRGEQLLSAAPGITLLNEGKTLQIESAKSSDSGEYRCVASNTAGSTELQYN 1968

  Fly   310 YAPHYVPPVVVS--------------GAGAGAGADPGAGASGEQTTISAATSTRAMMGGG----- 355
            ...:..|.:|..              ...|....:|......:|..:|.|.:...:|..|
Frog  1969 LLVNVAPRIVSMMDFATFLVNEQVWLECNATGVPEPAIMWLKDQVPVSTAIAGLQIMEQGRILSL 2033

  Fly   356 --GGVAGAG-FSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMDKLVPNYDNAEHQMKFYD 417
              ..|:.:| :|..|..|         .|...|.:.||          ..||.....|.......
Frog  2034 RAAHVSDSGIYSCVAVNP---------AGEDSHHIALQ----------VFVPPTIMGEELNSSIA 2079

  Fly   418 IRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKFI-IDKTDTNDDGKYSCE 481
            :..||:|.|. ....|..::.|.|:|..:...|.::     :.|:..:: ||:....|.|:|:||
Frog  2080 VNQPLLLECQ-STAIPPPLITWLKDGRPLLQRPGVQ-----VIDDGHYLQIDQAQLRDAGRYTCE 2138

  Fly   482 FDGVSKEIEVIARVVVRVP--------SNTAVVEGEKMSVTCSVVGT-KPELTWTFANVTLTNAT 537
            ....:...|....|::.||        .:.:::||:.:|.||...|. .|.||||...:.||
Frog  2139 ASNDAGRTEKHYNVIIWVPPSFPEPSAPHHSIIEGQPVSFTCECTGVPPPTLTWTKNGLPLT--- 2200

  Fly   538 DRFILKPDDNGVPNA---ILTLDNVTLDDRGEYKCIGRNAA---------NVY-----GGNTTTP 585
                  .:|:|:.:|   :|.:..|.|.|.|.|.|...|.|         .||     .|::.||
Frog  2201 ------VEDSGLVSAGGRLLQIGKVQLSDEGSYICECSNQAGSNKKEYWLEVYAQPMIAGSSNTP 2259

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.