DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bsg and pxdn

DIOPT Version :9

Sequence 1:NP_723346.2 Gene:Bsg / 318841 FlyBaseID:FBgn0261822 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_009291604.1 Gene:pxdn / 100332937 -ID:- Length:1468 Species:Danio rerio


Alignment Length:231 Identity:58/231 - (25%)
Similarity:92/231 - (39%) Gaps:48/231 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 QGHQVHLQHQTLLPVKMDKLVPNYDNAEHQMKFYDIRS--PLVLSCNVKDGTPGGVLIWKKNGTA 445
            ||..|    .||...:::..||...:....:   |:.|  .:..:|.. :|.|...:||.:|..|
Zfish   224 QGRSV----ATLTAHELNCEVPRITSEPQDV---DVTSGNTVYFTCRA-EGNPKPQIIWLRNNNA 280

  Fly   446 VTDVPSLRG--RFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRV--------- 499
            :    ::|.  |..|:.|....|.|..:| |.|.|.|....|:.|::. :.|.:|.         
Zfish   281 L----NMRDDTRLNLLEDGTLMIQDTRET-DQGVYQCMAKNVAGEVKT-SEVTLRYFRSPSRPSF 339

  Fly   500 ---PSNTAVVEGEKMSVTCSVVG-TKPELTWTFANVTLTNATDRFILKPDDNGVPNAILTLDNVT 560
               |.||.|:.||.:::.||..| .:|.:|||..:.:......|.      |..|:..|.:.|:.
Zfish   340 VIQPQNTEVLVGESVTLECSATGQPQPRVTWTRGDQSALPVDPRI------NITPSGGLFIQNIH 398

  Fly   561 LDDRGEYKCIGRNAANVYGGN-----------TTTP 585
            ..|.|:|.|...|..:....|           |.||
Zfish   399 QADGGQYTCFASNNVDTIHANAYIIVQARPQFTVTP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BsgNP_723346.2 IG_like 420..497 CDD:214653 22/80 (28%)
Ig 423..497 CDD:299845 21/75 (28%)
IG_like 500..583 CDD:214653 24/94 (26%)
Ig 512..575 CDD:143165 17/63 (27%)
pxdnXP_009291604.1 LRRNT 31..57 CDD:214470
leucine-rich repeat 59..106 CDD:275378
LRR_4 105..146 CDD:289563
LRR_8 106..165 CDD:290566
leucine-rich repeat 107..130 CDD:275378
LRR_4 130..168 CDD:289563
leucine-rich repeat 131..154 CDD:275378
leucine-rich repeat 155..178 CDD:275378
leucine-rich repeat 179..191 CDD:275378
LRRCT 187..238 CDD:214507 5/17 (29%)
Ig 241..328 CDD:299845 24/96 (25%)
I-set 241..328 CDD:254352 24/96 (25%)
Ig 341..424 CDD:299845 24/88 (27%)
IG_like 343..424 CDD:214653 24/86 (28%)
I-set 428..514 CDD:254352 3/7 (43%)
Ig 441..514 CDD:299845
I-set 520..606 CDD:254352
Ig 537..605 CDD:299845
An_peroxidase 736..1277 CDD:281139
peroxidasin_like 857..1296 CDD:188658
VWC 1410..1461 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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