DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and runx3

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001349273.1 Gene:runx3 / 58127 ZFINID:ZDB-GENE-000605-2 Length:438 Species:Danio rerio


Alignment Length:405 Identity:144/405 - (35%)
Similarity:186/405 - (45%) Gaps:120/405 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..|||||.:
Zfish    68 DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAS 132

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|.|||||||.:|||||||||||||........|
Zfish   133 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTGPPQVATYHRAIKVTVDGPREPRRHRVKPDDP 197

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476
            |        :.:.|      .|.::|..:|                            |::.:.|
Zfish   198 H--------KQFSD------RLSDIERFQR----------------------------ASLRMNP 220

  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKPNAPHIQAAEMMGAGEWTNG-- 539
                            |.|..:...::||..::|........:.:.|.::..::.....||:.  
Zfish   221 ----------------GNGTTRPHQTHYSPSSTTQIPGLWPDQIDPPTLKTCKVEDDLRWTSTDL 269

  Fly   540 ----------SSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMG 594
                      |..:|..:..||.|:|      :|..:           :|.|.|.|:||....  
Zfish   270 FQQRTSFPSLSPLTAPRFSDSHMHYP------SHFTY-----------SANPSSTGIGGLSVA-- 315

  Fly   595 MGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLP---EMHGHGFATD--PYQTAGYGGGNT 654
             ||..                    :.:|..:||...|   ..:.| |.|:  ||... ||   |
Zfish   316 -GMPT--------------------SSRYHTYLPPPYPGNQNQNSH-FQTNSSPYHLY-YG---T 354

  Fly   655 GGGSASKSELDYGGS 669
            |.||...|.:..|||
Zfish   355 GSGSYQFSMIPTGGS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 94/120 (78%)
runx3NP_001349273.1 Runt 69..190 CDD:307137 94/120 (78%)
RunxI 334..438 CDD:312115 15/41 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.010

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