DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and runx1

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_571678.1 Gene:runx1 / 58126 ZFINID:ZDB-GENE-000605-1 Length:451 Species:Danio rerio


Alignment Length:601 Identity:179/601 - (29%)
Similarity:233/601 - (38%) Gaps:186/601 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 SSSTASNNNNNGAS-NSNSNNNNAVHQDLLWMERLVQKRQQEHPGELVRTSNPYFLCSALPAHWR 305
            |::.:|...:.|.. .:..:...|:...|...:|.:.:...:||||||||.:|.||||.||.|||
Zfish    21 STTLSSGKMSEGLPLGAQESTGAALVGKLRMADRSMVEVLSDHPGELVRTDSPNFLCSVLPTHWR 85

  Fly   306 SNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFTTQMKNDVAKFNDLRFVGRSGRGKS 370
            .|||||:|||||||.::.|||.||:.||||||..|||||.|..:||.||:|||||||||||||||
Zfish    86 CNKTLPIAFKVVALGDIPDGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKS 150

  Fly   371 FTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGPHYRALGLGQRPYIDGFPSTKALHE 435
            |||||||.|:|||||||.:|||:|||||||||         .:|     |:|  |......||..
Zfish   151 FTLTITVFTNPPQVATYQRAIKITVDGPREPR---------RHR-----QKP--DEAVKPGALAF 199

  Fly   436 LESLRRSAK-------VAAVTTAAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGGAG 493
            .|.|||||.       .|..|..........|.|::....:..:..:|:..              
Zfish   200 SEQLRRSAMRCSPHHGPAPNTRPTLNTPPFGSPAHSQIPDSRQMQTSPSWS-------------- 250

  Fly   494 AGLVQQLSSNYSSPNST--INSDCQVYKPNAPHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPH 556
                .:.|..|..|.||  ::....: .||...:...|:....:...|...|    :.|....|.
Zfish   251 ----YEQSYPYLGPISTPAVHPTTPI-SPNRTALHCPELTAFTDPRVGLERS----FPSLPSLPD 306

  Fly   557 AHHAHAHLQHQMALPPPPPPPAA-----APVSVGVGGNGATMGMGMGVGVGMGMNHYGGGYDSAN 616
            ...:.         |..|.|..|     .||:             ..:|:||          ||.
Zfish   307 GRFSD---------PRVPYPTGAFTYTPTPVT-------------SAIGIGM----------SAM 339

  Fly   617 SLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYGGGNTGGGSASKSELDYGGSYNQAWSNGYQNY 681
            |..||:|..:||...|              ||......|...||.|      .|:..:|:...:|
Zfish   340 SSPAGRYHTYLPPAYP--------------AGSSQAQAGAFQASSS------PYHLYYSSAAGSY 384

  Fly   682 QYGSCLATAQYGPQAAPPPQPPPPPPVVLCPQLYSTVNQNQIHLHLHSSEKLEQYLGTATSADHL 746
            |:...       |..........||.::.|                             |:|.  
Zfish   385 QFSMM-------PSGGAAAGERSPPRILPC-----------------------------TNAS-- 411

  Fly   747 TIGSLTGSSRSSIEIGQDQYHQQVHHAQQQQQQQQQQQQVHHPQ-QQQVESAGEVGGSGAGGVES 810
                 |||:                              :.||. ..|.|...|..||.:....|
Zfish   412 -----TGSA------------------------------LLHPSLPNQSEGVVEAEGSHSSSPTS 441

  Fly   811 AREEDVGDLSQVWRPY 826
            ...|      .|||||
Zfish   442 MSVE------AVWRPY 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 93/120 (78%)
runx1NP_571678.1 Runt 63..184 CDD:307137 93/129 (72%)
Atrophin-1 <160..426 CDD:331285 88/429 (21%)
RunxI 359..451 CDD:312115 29/176 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580318
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.840

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