DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and Runx1

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_017453542.1 Gene:Runx1 / 50662 RGDID:2283 Length:464 Species:Rattus norvegicus


Alignment Length:437 Identity:161/437 - (36%)
Similarity:213/437 - (48%) Gaps:99/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||||||||.:|.||||.||.|||.|||||:|||||||.:|.|||.||:.||||||..|||||.|
  Rat    71 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 135

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||:|||||||||.        
  Rat   136 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR-------- 192

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSA-KVA----AVTTAAAAAATAASAANAVAAA--- 468
            |.:.|....:|....|  ::.|.|||.|||:| :|:    |.|....|:...::|.|....:   
  Rat   193 HRQKLDDQTKPGSLSF--SERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 255

  Fly   469 -AAAVAVTPTGGG-------GGVA-----AGGVAGGAGAGLVQ---QLSSNYS-SPNSTINSDCQ 516
             |..:..:|....       |.:.     |..::.|..:|:..   :|||..| :|:.|...|.:
  Rat   256 DARQIQPSPPWSYDQSYQYLGSITSSVHPATPISPGRASGMTSLSAELSSRLSTAPDLTAFGDPR 320

  Fly   517 VYKPNAPHIQAAEMMGAGEWTNG-----------SSSSAAAYYHSHAHHPHAHHAHAHLQHQMAL 570
            .: |..|.|....|...|.:|..           |:.|:.:.||::                  |
  Rat   321 QF-PTLPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSTSRYHTY------------------L 366

  Fly   571 PPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNH--YG---GGYDSANSLEAGQYAAHLPAV 630
            |||.|              |::.........|....|  ||   |.|..  |:..|:.:.  |.:
  Rat   367 PPPYP--------------GSSQAQAGPFQTGSPSYHLYYGTSAGSYQF--SMVGGERSP--PRI 413

  Fly   631 LPEMHGHGFATDPYQTAGYGGGNTGGGSASKSE-LDYGGSYNQAWSN 676
            ||          |...|..|.........|:|: ::..||::.:.:|
  Rat   414 LP----------PCTNASTGAALLNPSLPSQSDVVETEGSHSNSPTN 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 95/120 (79%)
Runx1XP_017453542.1 Runt 68..194 CDD:395684 95/130 (73%)
RunxI 374..464 CDD:400691 19/91 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340521
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X738
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.800

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