DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and runx2a

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_998023.1 Gene:runx2a / 405784 ZFINID:ZDB-GENE-040629-3 Length:467 Species:Danio rerio


Alignment Length:416 Identity:147/416 - (35%)
Similarity:188/416 - (45%) Gaps:102/416 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||.|||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..|||||.:
Zfish    69 DHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 133

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||||||||||||.        
Zfish   134 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRR-------- 190

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476
            |.:.|....:|.:    .::.|.|||.||::....||.|.:...:..|:..          :..|
Zfish   191 HRQKLEDPPKPPL----FSERLSELERLRQTTMRVAVQTQSPRPSLNATPN----------SFNP 241

  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKP-----NAPHIQAAEMMGAGEW 536
            .|                  ..|:|....:.:|...|..|.|.|     .:|.|.:         
Zfish   242 QG------------------QTQISDPRQAQSSPPWSYEQPYPPYLSQMTSPSIHS--------- 279

  Fly   537 TNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPP----------------PPPPAAAPVSVG 585
            |...||:.|....:.:..|......:.|....|.|..                |.|....|.:..
Zfish   280 TTPLSSTRATGLPTISDVPRRLSGTSELSPFSADPRQFERQFPSLSSLTDSRFPSPRMHYPATFT 344

  Fly   586 VGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAG-- 648
            ......|.||.:|:..                  ...|..:||...|....:  .:.|:||:.  
Zfish   345 YTPTPVTSGMSLGMST------------------TTHYHTYLPPPYPGSTQN--QSGPFQTSSTP 389

  Fly   649 --YGGGNTG--------GGSASKSEL 664
              |.|.::|        ||..|.|.:
Zfish   390 YLYYGASSGSYQFPMVPGGDRSPSRM 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 94/120 (78%)
runx2aNP_998023.1 Runt 70..191 CDD:279225 94/128 (73%)
RunxI 376..467 CDD:285676 10/42 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.