DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and RunxB

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001259745.1 Gene:RunxB / 33051 FlyBaseID:FBgn0259162 Length:663 Species:Drosophila melanogaster


Alignment Length:707 Identity:208/707 - (29%)
Similarity:288/707 - (40%) Gaps:174/707 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 SASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVH----------- 266
            :|:..::......|:.::::.::.:|...:::..:||||:..:|:|:||||.|.           
  Fly    38 TATTTTTKRRNAESSASSNNNNNNNTSTTNNNNTNNNNNSTTNNNNNNNNNNVKTKPVDTSPYLT 102

  Fly   267 -QDLLWMERLVQKRQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTI 330
             ::|:  ||.|.....|||||||:|.:|:.:|:.||.|||||||||:||||:||.||.|||.|||
  Fly   103 PENLI--ERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVLALGEVMDGTIVTI 165

  Fly   331 RAGNDENCCAELRNFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTV 395
            |||||||.|.||||.|..|||.|||||||||||||||||||||||.::|:|.|:|||.|||||||
  Fly   166 RAGNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPIQIATYTKAIKVTV 230

  Fly   396 DGPREPRSKTSPTGGPHYRALG---LGQRPYIDGFPSTKA--LHELESLRRSA-----KVAAVTT 450
            |||||||||....|. |..|.|   .|..|.:.|.|....  .|.|..:....     :......
  Fly   231 DGPREPRSKVRHQGF-HPFAFGPQRFGPDPLMAGLPFKLPGFAHHLVGMHSHLHAPDWRAHMALG 294

  Fly   451 AAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGG-------------AGAGLVQQLSS 502
            ...||.|||......|||      .||..|    ..|::|.             |..|.....:|
  Fly   295 GRPAAFTAAPFFGHHAAA------FPTASG----LRGLSGDSQQHQQQQQQHQLATVGAAHSTTS 349

  Fly   503 NYSSPNSTINSDCQ----VYKP---NAPHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHA 560
            ...||.:|..|..|    |..|   :.|.:.:.:.......:|.::||:              |.
  Fly   350 PEGSPTTTTTSGTQLSAFVQPPMTSSPPPVTSLQHDNNNNNSNNNNSSS--------------HI 400

  Fly   561 HAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAA 625
            .|..:..               |:.|.|:...       .:|..:.|     |...:....:..|
  Fly   401 DAGFESD---------------SISVTGSPRK-------SLGSPLTH-----DEEEAEAEAEAEA 438

  Fly   626 HLPAVLPEMHGHGFATDPYQTAGYGGGNTG----------GGS-------ASKSELDYGGSYNQA 673
            ...|...|....|.:.:       |||..|          ||:       :.|:..:..|.:..|
  Fly   439 EAEAEAEEAEVGGLSRN-------GGGIQGPLHSESSPGSGGAFTALIQRSGKNPTELFGGFAAA 496

  Fly   674 WSNGY--QNYQYGSCLATAQYGPQAAPPPQPPPPPPVVLCPQLYSTVNQNQIHLHLHSSEKLEQY 736
            ..|.:  ..:.:...||...:       .|.|      |.||     :...::..|:.|.....:
  Fly   497 GGNHFAPSGHSFNPALAAQLF-------LQSP------LLPQ-----SSQWLYTQLYGSYSDLPW 543

  Fly   737 LGTATSADHLTIGSLTGSSRSSI-EIGQDQYHQQV-----------HHAQQQQQQQQQQ------ 783
            |..|.:|....|.  .|...|.| .:|.:..|..|           |:....:......      
  Fly   544 LRNAAAAAAANIN--PGQENSGIPPLGSNPDHDGVNLIKRCVTLITHNPPDAENANPNASPPVSS 606

  Fly   784 -------------QQVHHPQQQQVESAGEVGGSGAGG-VESAREEDVGDLSQVWRPY 826
                         ..|....:....|:|..||.|.|| |...|.......:.|||||
  Fly   607 TRRSPSPVETIDLDDVSTTSRSASGSSGHGGGVGGGGAVGPIRTRTPKPSADVWRPY 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 93/120 (78%)
RunxBNP_001259745.1 Runt 118..239 CDD:279225 93/120 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 132 1.000 Domainoid score I3175
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D109070at6656
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 1 1.000 - - otm14562
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
77.020

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