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Protein Alignment lz and rnt-1
DIOPT Version :9
Sequence 1: | NP_511099.2 |
Gene: | lz / 31883 |
FlyBaseID: | FBgn0002576 |
Length: | 826 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001370335.1 |
Gene: | rnt-1 / 172243 |
WormBaseID: | WBGene00004393 |
Length: | 301 |
Species: | Caenorhabditis elegans |
Alignment Length: | 124 |
Identity: | 68/124 - (54%) |
Similarity: | 83/124 - (66%) |
Gaps: | 1/124 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 280 QQEHPGE-LVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELR 343
||..|.: |.::|:|..|.:|||.||||||:....|.||.|..|.|.|.|:|.|||||..|.|:|
Worm 14 QQPAPAKTLEKSSSPNILYTALPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPCEEVR 78
Fly 344 NFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPR 402
|...::...||||||||||||||||:.|.|||.:.::|..|||....|||||||||:.|
Worm 79 NEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPMMVATVKNVIKVTVDGPRDAR 137
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lz | NP_511099.2 |
Runt |
283..404 |
CDD:279225 |
66/121 (55%) |
rnt-1 | NP_001370335.1 |
Runt |
22..137 |
CDD:395684 |
64/114 (56%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
132 |
1.000 |
Domainoid score |
I3175 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3982 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000993 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm14562 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11950 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X738 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
8 | 7.870 |
|
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