DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and Runx3

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_569109.1 Gene:Runx3 / 156726 RGDID:620082 Length:409 Species:Rattus norvegicus


Alignment Length:531 Identity:155/531 - (29%)
Similarity:202/531 - (38%) Gaps:176/531 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 PAGPHPPAMVTSSSTS-PTGNGWSSSTGDFKGITAVATATGGGVGGATQGATASTGATAAEVLAV 210
            |..|......|..||: |.|.|.....|:..|  |::.....|.||.|:....|    ..:||| 
  Rat     4 PVDPSTSRRFTPPSTAFPCGGGGGGKMGENSG--ALSAQAAAGPGGRTRPEVRS----MVDVLA- 61

  Fly   211 SSSASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVHQDLLWMERL 275
                                                                             
  Rat    62 ----------------------------------------------------------------- 61

  Fly   276 VQKRQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCA 340
                  :|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..|
  Rat    62 ------DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSA 120

  Fly   341 ELRNFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKT 405
            ||||.:..|||.||:||||||||||||||||||||||.|:|.|||||.:|||||||||||||.  
  Rat   121 ELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRR-- 183

  Fly   406 SPTGGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAA 470
                  |.:.:....:.:.|.|...:              ..||.:..:...:.|..:..::.|.
  Rat   184 ------HRQKIEDQTKAFPDRFGDLR--------------MRVTPSTPSPRGSLSTTSHFSSQAQ 228

  Fly   471 AVAVTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTIN--SDCQVYKPNAPHIQAAEMMGA 533
                ||..|                            :|.:|  ||.:.:..:.|.:|       
  Rat   229 ----TPIQG----------------------------SSDLNPFSDPRQFDRSFPTLQ------- 254

  Fly   534 GEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMG 598
                   |.:.:.:.....|:|.|..|..             |.:|.|....:||....   ||.
  Rat   255 -------SLTESRFPEGRMHYPGAMSAAF-------------PYSATPSGTSLGGLSVA---GMP 296

  Fly   599 VGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYGGGNTG-------- 655
            ........:....|..|...::|.:.|: ||.....:|....:..:..|..|||...        
  Rat   297 ASSRFHHTYLPPPYPGAPQSQSGPFQAN-PAPYHLFYGTSSGSYQFSMAAAGGGERSPTRMLTSC 360

  Fly   656 --GGSASKSEL 664
              |.|.|...|
  Rat   361 PTGASVSAGNL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 93/120 (78%)
Runx3NP_569109.1 Runt 63..184 CDD:279225 93/128 (73%)
RunxI 314..409 CDD:285676 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X738
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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