DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lz and Runx3

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_062706.2 Gene:Runx3 / 12399 MGIID:102672 Length:423 Species:Mus musculus


Alignment Length:544 Identity:164/544 - (30%)
Similarity:212/544 - (38%) Gaps:201/544 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HPPAMVTSSSTSPTGNGWSSSTGDFKGITAVATA--TGGGVGGATQGATASTGATAAEVLAVSSS 213
            :.|..:...|||             :..|..:||  .|||.||                      
Mouse    13 YTPTFIRDPSTS-------------RRFTPPSTAFPCGGGGGG---------------------- 42

  Fly   214 ASVGSSSPTGGASNGTAHSGHSGHTGGHSSSTASNNNNNGASNSNSNNNNAVHQDLLWMERLVQK 278
             .:|.:|   ||.:..|.:|..|.|.....|..                     |:|        
Mouse    43 -KMGENS---GALSAQATAGPGGRTRPEVRSMV---------------------DVL-------- 74

  Fly   279 RQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELR 343
              .:|.||||||.:|.||||.||:|||.|||||:|||||||.:|.|||.||:.||||||..||||
Mouse    75 --ADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELR 137

  Fly   344 NFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPT 408
            |.:..|||.||:||||||||||||||||||||||.|:|.|||||.:|||||||||||||.     
Mouse   138 NASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRR----- 197

  Fly   409 GGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVA 473
               |.:.:....:.:.|.|...:              ..||.:..:...:.|..:..::.|.   
Mouse   198 ---HRQKIEDQTKAFPDRFGDLR--------------MRVTPSTPSPRGSLSTTSHFSSQAQ--- 242

  Fly   474 VTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNS------TINS-------DCQVYKPNA--- 522
             ||..|...:                  :.:|.|..      |:.|       |.:::.|.|   
Mouse   243 -TPIQGSSDL------------------NPFSDPRQFDRSFPTLQSLTESRFPDPRMHYPGAMSA 288

  Fly   523 --PHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVG 585
              |:  :|...|.   :.||.|.|.....|..||.:             ||||.|   .||.|  
Mouse   289 AFPY--SATPSGT---SLGSLSVAGMPASSRFHHTY-------------LPPPYP---GAPQS-- 330

  Fly   586 VGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGHGFATDPYQTAGYG 650
                                             ::|.:.|: ||.....:|....:..:..|..|
Mouse   331 ---------------------------------QSGPFQAN-PAPYHLFYGASSGSYQFSMAAAG 361

  Fly   651 GGN----------TGGGSASKSEL 664
            ||.          ..|.|.|...|
Mouse   362 GGERSPTRMLTSCPSGASVSAGNL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 93/120 (78%)
Runx3NP_062706.2 Runt 77..198 CDD:279225 93/128 (73%)
RunxI 328..423 CDD:285676 15/94 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.870

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