DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and Runx1

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001104491.1 Gene:Runx1 / 12394 MGIID:99852 Length:465 Species:Mus musculus


Alignment Length:440 Identity:158/440 - (35%)
Similarity:202/440 - (45%) Gaps:110/440 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||||||||.:|.||||.||.|||.|||||:|||||||.:|.|||.||:.||||||..|||||.|
Mouse    71 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 135

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||:|||||||||.        
Mouse   136 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR-------- 192

  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476
            |.:.|....:|....|  ::.|.|||.|||       |....:....|...|..|:...:.|..|
Mouse   193 HRQKLDDQTKPGSLSF--SERLSELEQLRR-------TAMRVSPHHPAPTPNPRASLNHSTAFNP 248

  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKPNAPHIQAAEMMGAGEWTNGSS 541
                                         .|.|.: .|.:..:|:.|            |:...|
Mouse   249 -----------------------------QPQSQM-QDARQIQPSPP------------WSYDQS 271

  Fly   542 SSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVG--VGGNGATMGMGMGVGVGMG 604
            ........|.:.||                       |.|:|.|  .|....:..:...:.....
Mouse   272 YQYLGSITSSSVHP-----------------------ATPISPGRASGMTSLSAELSSRLSTAPD 313

  Fly   605 MNHYGGGYDSANSLEAGQYAAHLPAVL-PEMHGHG-FATDPYQTAGYGGGNTGGGSASKSEL--- 664
            :..:|         :..|:.. ||::. |.||..| |...|..|:|.|.|.:...|||:...   
Mouse   314 LTAFG---------DPRQFPT-LPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSASRYHTYLP 368

  Fly   665 -DYGGSYNQAWSNGYQ------NYQYGSCLATAQY---GPQAAPPPQPPP 704
             .|.|| :||.:..:|      :..||:...:.|:   |.:.:||...||
Mouse   369 PPYPGS-SQAQAGPFQTGSPSYHLYYGASAGSYQFSMVGGERSPPRILPP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 95/120 (79%)
Runx1NP_001104491.1 Runt 72..193 CDD:307137 95/128 (74%)
RunxI 375..465 CDD:312115 11/43 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836814
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.800

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