DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and runx3

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_002936643.1 Gene:runx3 / 100485729 XenbaseID:XB-GENE-487784 Length:396 Species:Xenopus tropicalis


Alignment Length:448 Identity:152/448 - (33%)
Similarity:195/448 - (43%) Gaps:130/448 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 NNGASNSNSNNNNAVHQDLLWMERLVQKRQQEHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFK 315
            ||||.||:........      .|.|.....:|.||||||.:|.||||.||:|||.|||||:|||
 Frog    28 NNGAINSSGPGRTRAE------IRTVVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFK 86

  Fly   316 VVALAEVGDGTYVTIRAGNDENCCAELRNFTTQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATS 380
            ||||.:|.|||.||:.||||||..|||||.:..|||.||:||||||||||||||||||||||.||
 Frog    87 VVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTS 151

  Fly   381 PPQVATYAKAIKVTVDGPREPRSKTSPTGGPHYRALGLGQRPYIDGFPSTKALHELESLRRSAKV 445
            |.|||||.:|||||||||||||.        |.:.|....:|:.|.|         ..||::.:|
 Frog   152 PTQVATYHRAIKVTVDGPREPRR--------HRQKLEEQSKPFSDRF---------SDLRQTFRV 199

  Fly   446 AAVTTAAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGGAGAGLVQQLSSNYSS-PNS 509
            ...:...|....    .|..::.|......||........            :|....:|: |:.
 Frog   200 QPNSNPRATLTN----TNPFSSQAQTQIQGPTDLNPFTDP------------RQFERPFSALPSL 248

  Fly   510 TIN--SDCQVYKPNAPHIQAAEMMGAGEWTNGSSSSAAAYYHSHAHHPHAHHAHAHLQHQMALPP 572
            |.:  ||.:::.|:|                  .|||.:|                         
 Frog   249 TESRFSDPRMHYPSA------------------MSSAFSY------------------------- 270

  Fly   573 PPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNHYGGGYDSANSLEAGQYAAHLPAVLPEMHGH 637
                 .|:|.:.|:||...|   ||.........:....|..::..::|                
 Frog   271 -----TASPSTTGIGGISMT---GMPTTTRFHHTYLPPPYPGSSQNQSG---------------- 311

  Fly   638 GFATDPYQTAGYGGGNTGGGSASKSELDYG---GSYNQAWSNGYQ--NYQYGSCLATA 690
                 |:||           :||...|.||   |||..:...|.:  :....||.:.|
 Frog   312 -----PFQT-----------NASPYHLYYGTSSGSYQFSMVAGERSPSRMLSSCTSVA 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 94/120 (78%)
runx3XP_002936643.1 Runt 54..175 CDD:366336 94/128 (73%)
RunxI 306..396 CDD:369907 16/80 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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