DRSC/TRiP Functional Genomics Resources

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Protein Alignment lz and runx2

DIOPT Version :9

Sequence 1:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001128588.1 Gene:runx2 / 100189546 XenbaseID:XB-GENE-482021 Length:468 Species:Xenopus tropicalis


Alignment Length:333 Identity:126/333 - (37%)
Similarity:168/333 - (50%) Gaps:78/333 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346
            :||.|||||.:|..|||.||:|||.|||||:|||||||.||.||:.||:.||||||..||.||.:
 Frog    82 DHPAELVRTDSPNLLCSVLPSHWRCNKTLPVAFKVVALGEVSDGSVVTVMAGNDENYSAEPRNAS 146

  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPR--------S 403
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|:|||||||||||        |
 Frog   147 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAMKVTVDGPREPRRHRQKLDDS 211

  Fly   404 KTS-----PTGGPHYRALGLG-----QRPYIDGFP-STKALHELESLRRS-------------AK 444
            |.|     ..|...:.::.:|     .||.::..| :.:...::...|::             :.
 Frog   212 KPSLFSERDLGRIPHPSMRMGVPPQSPRPSLNSSPFNPQGQSQIADPRQTQSSPPWSYDQSYPSY 276

  Fly   445 VAAVTTAAAAAATAASAANAVAAAAAAVAVTPTGGGGGVAAGGVAGGAGAGLVQQLS-SNYSSPN 508
            ::.:|:.:..:.|..|:..  .....|::..|....|....|..:.......:..|: |.:|:|.
 Frog   277 LSQMTSPSIHSTTPLSSTR--GTGLPAISDVPRRLSGASELGPFSDPRQFTSISSLTESRFSNPR 339

  Fly   509 ----STINSDCQVYKPNAPHIQAAEMMGAGEWTNGSS--SSAAAYYHSHAHHPHAHHAHAHLQHQ 567
                :|.     .|.|..              |.|.|  .||..:||::                
 Frog   340 MHYPATF-----TYSPPV--------------TTGMSLGMSATTHYHTY---------------- 369

  Fly   568 MALPPPPP 575
              ||||.|
 Frog   370 --LPPPYP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lzNP_511099.2 Runt 283..404 CDD:279225 91/128 (71%)
runx2NP_001128588.1 Runt 83..204 CDD:279225 91/120 (76%)
RunxI 378..468 CDD:285676
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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