DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and NOT3

DIOPT Version :10

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_012226.3 Gene:NOT3 / 854773 SGDID:S000001300 Length:836 Species:Saccharomyces cerevisiae


Alignment Length:421 Identity:102/421 - (24%)
Similarity:143/421 - (33%) Gaps:131/421 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  6013 VPTTRPFEASTPSPASLKTTVPSVTSEATTNVPIGSTGQRIGTTPSESPETPTTLPSDFTTRPHS 6077
            :|...|  :|||||.                :|:....:....:||.||....|.|.:....  |
Yeast   297 IPVAGP--SSTPSPV----------------IPVADASKETERSPSSSPIHNATKPEEAVKT--S 341

  Fly  6078 EKTTESTRD--VPTTRPFETSTPSPASLETTVPSVTLETTTNV--PIGSTGGQVTEQTTSSPS-- 6136
            .|:..|:.|  :|             ||:.:..|.|.||.|||  .|..|...:|..||..|:  
Yeast   342 IKSPRSSADNLLP-------------SLQKSPSSATPETPTNVHTHIHQTPNGITGATTLKPATL 393

  Fly  6137 ------EVRTTIRVEESTLPSR---SADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTR 6192
                  |::..:...::....|   ||..|..:.|.:|||..:..||..::.....|..:.|   
Yeast   394 PAKPAGELKWAVAASQAVEKDRKVTSASSTISNTSTKTPTTAAATTTSSNANSRIGSALNTP--- 455

  Fly  6193 PFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTGQ-------------------TTAPPS- 6237
              :.|| |..||:......:|...|...:.:.|.....|                   .|.|.| 
Yeast   456 --KLST-SSLSLQPDNTGASSSAATAAAVLAAGAAAVHQNNQAFYRNMSSSHHPLVSLATNPKSE 517

  Fly  6238 -EVRTTI---GVEESTLPSRSTDRTSPSESPE------TPT--TLPSDFITRPHSEQTTESTRDV 6290
             ||.||:   |.|.:|   :........||||      .||  ....||          ||.|| 
Yeast   518 HEVATTVNQNGPENTT---KKVMEQKEEESPEERNKLQVPTFGVFDDDF----------ESDRD- 568

  Fly  6291 PTTRPFE---ASTPSPASLKTTVPSVTSEATTNVPIGSTGGQVTEQTTSS------PSEVRTTI- 6345
            ..|.|.|   .|||...||:      ..||.||        ::.::..|.      ||.|:..| 
Yeast   569 SETEPEEEEQPSTPKYLSLE------QREAKTN--------EIKKEFVSDFETLLLPSGVQEFIM 619

  Fly  6346 -------RVEESTLPSRSTDRTTPSESPETP 6369
                   ::|......||.|....|...|.|
Yeast   620 SSELYNSQIESKITYKRSRDMCEISRLVEVP 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:463759
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:463759
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
Herpes_BLLF1 <4032..4489 CDD:282904
Herpes_BLLF1 <4334..4797 CDD:282904
PHA03255 4845..>5021 CDD:165513
DUF5585 4959..5356 CDD:465521
PHA03247 <5170..5799 CDD:223021
PRK12495 <5749..5877 CDD:183558
PHA03247 <5865..6485 CDD:223021 102/421 (24%)
Chi1 6385..>6609 CDD:442692
Herpes_BLLF1 <6607..7102 CDD:282904
Herpes_BLLF1 <7027..7490 CDD:282904
DUF5585 7550..7954 CDD:465521
DUF5585 7881..>8130 CDD:465521
Atrophin-1 18652..>19081 CDD:460830
PHA03247 <18873..19514 CDD:223021
ZP 22576..22811 CDD:214579
NOT3NP_012226.3 Not3 2..230 CDD:461155
PHA03247 <293..399 CDD:223021 34/134 (25%)
NOT2_3_5 <695..782 CDD:461199
Blue background indicates that the domain is not in the aligned region.

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