DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and CRH1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_011705.1 Gene:CRH1 / 853102 SGDID:S000003421 Length:507 Species:Saccharomyces cerevisiae


Alignment Length:611 Identity:127/611 - (20%)
Similarity:203/611 - (33%) Gaps:184/611 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  4428 TTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDVPTTRPF 4492
            |..|.|.:.:|....|||   .:||.||.:.|..:...|           |||..|.|......|
Yeast     8 TVLSASSLLSTFAAAEST---ATADSTTAASSTASCNPL-----------KTTGCTPDTALATSF 58

  Fly  4493 EASTPSSASLETTVPSVTLETTTNVPIGSTGGQVT-EQTTSSPS----------EVRTTIRVEES 4546
            .....||:...|     .|:....:..||.|..:| .:...:||          ::...::....
Yeast    59 SEDFSSSSKWFT-----DLKHAGEIKYGSDGLSMTLAKRYDNPSLKSNFYIMYGKLEVILKAANG 118

  Fly  4547 T-------LPS-----------------------RSADRTTLSESP----ETPTTLPSDFTIRPH 4577
            |       |.|                       ...|.||.....    :|||....::|:...
Yeast   119 TGIVSSFYLQSDDLDEIDIEWVGGDNTQFQSNFFSKGDTTTYDRGEFHGVDTPTDKFHNYTLDWA 183

  Fly  4578 SEQTT-----ESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPS 4637
            .::||     ||.|.:..|.. |....||..|...:.:..........|...||: |....||  
Yeast   184 MDKTTWYLDGESVRVLSNTSS-EGYPQSPMYLMMGIWAGGDPDNAAGTIEWAGGE-TNYNDAP-- 244

  Fly  4638 EFRTTIRVEESTLPSRSTDRTTPSESPETPTILPSDSTTRTYSDQTTESTRDVPTTRPFEASTPS 4702
               .|:.:|:..:...||.:                  ..||.||                 :.|
Yeast   245 ---FTMYIEKVIVTDYSTGK------------------KYTYGDQ-----------------SGS 271

  Fly  4703 PASLETTVPSV---TLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSE 4764
            ..|:|....|:   ..:...:..:.:.||.::..:|||     :|:....|:..|.|...|..|.
Yeast   272 WESIEADGGSIYGRYDQAQEDFAVLANGGSISSSSTSS-----STVSSSASSTVSSSVSSTVSSS 331

  Fly  4765 SPETPTTLPSDFITRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTG 4829
            :..|.::..|..::...|..::.||            :|||:   |...|.|| .:::|...|:.
Yeast   332 ASSTVSSSVSSTVSSSSSVSSSSST------------SPSSS---TATSSKTL-ASSSVTTSSSI 380

  Fly  4830 GQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDV 4894
            ....:|::||..:...:....||.:           .|.:||.|:.|          ||.|| ..
Yeast   381 SSFEKQSSSSSKKTVASSSTSESII-----------SSTKTPATVSS----------TTRST-VA 423

  Fly  4895 PTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGG------QVTEQTTSSPSEVRTTIRVEE 4953
            |||:....|:.|                   |:...||      .||..||...|:..:||  :.
Yeast   424 PTTQQSSVSSDS-------------------PVQDKGGVATSSNDVTSSTTQISSKYTSTI--QS 467

  Fly  4954 STLPSRSTDRTTPSESPETPTTLPSD 4979
            |:..:.||:....|...:...:||.:
Yeast   468 SSSEASSTNSVQISNGADLAQSLPRE 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395 59/299 (20%)
DUF4758 4275..4448 CDD:292572 7/19 (37%)
DUF4758 4377..4574 CDD:292572 38/190 (20%)
DUF4758 4581..4754 CDD:292572 35/180 (19%)
DUF4758 4683..4847 CDD:292572 32/166 (19%)
DUF4758 4785..4964 CDD:292572 43/184 (23%)
DUF4696 4841..5385 CDD:292395 32/145 (22%)
DUF4758 4887..5098 CDD:292572 25/99 (25%)
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
CRH1NP_011705.1 GH16_fungal_CRH1_transglycosylase 74..258 CDD:185692 34/190 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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