DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and SEC31

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_010086.2 Gene:SEC31 / 851332 SGDID:S000002354 Length:1273 Species:Saccharomyces cerevisiae


Alignment Length:1364 Identity:264/1364 - (19%)
Similarity:415/1364 - (30%) Gaps:393/1364 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  6458 STDRT--------SPSESPETPTTLPSDF--ITRPHSEKTTESTRDVPTTRPFEASTPSSASSGN 6512
            |||.:        :.||.|.....:.|.|  :...|:.|......|..:...:      |.:..|
Yeast    37 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELY------STNEAN 95

  Fly  6513 NC--SISYFRNHYKC--SNRFNRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTRPF 6573
            |.  |::.|.||...  :.:||...|....|..........|.      .:.|||..:.....|.
Yeast    96 NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM------NKCTESPSNYTPLTPG 154

  Fly  6574 EASTPSPASLETTVPSVTSETTTNVPIGSTGGQ--------------VTGQTTAPPSEVRTTIRV 6624
            :    |.:|::..:....:::..:| ..|.|..              :....|:|.|.::..:.|
Yeast   155 Q----SMSSVDEVISLAWNQSLAHV-FASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 214

  Fly  6625 EESTLPSRSTDRTTPSESPETPTILPSDFTTRPHSDQTTESTRDVPTTRPFEASTPRPVTLETAV 6689
            .| ..|..||...|.:.|...|:||..|..                     .|:||         
Yeast   215 VE-WHPKNSTRVATATGSDNDPSILIWDLR---------------------NANTP--------- 248

  Fly  6690 PSVTLETTTNVPIGSTGGQVTGQTTATPSEVRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSD 6754
                |:|...   |...|.::          ......:|..|.|...|.|....:||:...| |.
Yeast   249 ----LQTLNQ---GHQKGILS----------LDWCHQDEHLLLSSGRDNTVLLWNPESAEQL-SQ 295

  Fly  6755 FTTRPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTEQTTSSP 6819
            |..|.:....|:...:.|..  |..     ||.:..:...|.:..||                  
Yeast   296 FPARGNWCFKTKFAPEAPDL--FAC-----ASFDNKIEVQTLQNLTN------------------ 335

  Fly  6820 SEVRTTIGLEESTLPSRSTDRTSPSESPETPTTLPSDFITRPHSDQTTESTRDVPTTRPFEAST- 6883
                        ||..:.|: |...|| ||      ||    .::.:.|.:::.||....:|.| 
Yeast   336 ------------TLDEQETE-TKQQES-ET------DF----WNNVSREESKEKPTVFHLQAPTW 376

  Fly  6884 ---PSPAS-------LETTVPSVTSETTTNVPIGSTGGQVTEQTTSSPSEVRTTIGL-------- 6930
               ||||:       |....|.....:.||..|.......|........:.:..|..        
Yeast   377 YGEPSPAAHWAFGGKLVQITPDGKGVSITNPKISGLESNTTLSEALKTKDFKPLINQRLVKVIDD 441

  Fly  6931 --EE--STLPSRSTDRTS-------PSESPETPTTLPSDFITRPHSDQTTESTRDVPTTRPFEAS 6984
              ||  :.|...|.|.|.       ..::.|:..   .|.......|...|..:.:.|....|..
Yeast   442 VNEEDWNLLEKLSMDGTEEFLKEALAFDNDESDA---QDDANNEKEDDGEEFFQQIETNFQPEGD 503

  Fly  6985 TPSSASLETT---------VPSVTLETTTN--------VPIGSTGGQVTEQ----------TTSS 7022
            ...|.::|.|         :.|....:..|        :.:.|...::.|.          :.||
Yeast   504 FSLSGNIEQTISKNLVSGNIKSAVKNSLENDLLMEAMVIALDSNNERLKESVKNAYFAKYGSKSS 568

  Fly  7023 PSEVRTTI--------------------------------------------RVEES-------- 7035
            .|.:..:|                                            |::|:        
Yeast   569 LSRILYSISKREVDDLVENLDVSQWKFISKAIQNLYPNDIAQRNEMLIKLGDRLKENGHRQDSLT 633

  Fly  7036 -TLPSRSTDRTTP---SESPETPTTLPSDFTT--RPHSDQTTESSRDVPTTQPF--EASTPRPVT 7092
             .|.:.|.|:...   ||.|:....|..|..|  ..||:..||..........|  .:||.....
Yeast   634 LYLAAGSLDKVASIWLSEFPDLEDKLKKDNKTIYEAHSECLTEFIERFTVFSNFINGSSTINNEQ 698

  Fly  7093 LQTAVLPVTSETTTNVPIGSTGG--QVTEQTTSSPS---EVRTTIRVEESTLPSRSTDRTTPSES 7152
            |....|...:.||      |||.  ..||...|.||   ||:|     |......::.::.|:::
Yeast   699 LIAKFLEFINLTT------STGNFELATEFLNSLPSDNEEVKT-----EKARVLIASGKSLPAQN 752

  Fly  7153 PETPTTLPSDFTTRPHSDQTTESSRDVPTTQPFESSTPRPVTLETAVPPVTSETTTNVPI-GSTG 7216
            |.|.||..:.:|       ..:::::||.       .|.|     .:|..||..:...|. |.|.
Yeast   753 PATATTSKAKYT-------NAKTNKNVPV-------LPTP-----GMPSTTSIPSMQAPFYGMTP 798

  Fly  7217 GQVTEQTTPSPSEVRTTIRIEESTFPSRSTDRTTPSESPETPTTLPSDFTTRPHSDQTTESTRDV 7281
            |.......|.|            ..|:.:|.....:|....|.:.||  ...|..::|..|||  
Yeast   799 GASANALPPKP------------YVPATTTSAPVHTEGKYAPPSQPS--MASPFVNKTNSSTR-- 847

  Fly  7282 PTTRPFESSTPRPVTLEIAVPPVTSETTTNVAIGSTGGQVTEQTTSSPSE----VRTTIRVEEST 7342
                 ..|..|.|.....|..|.|:.:||::          .|.|.:|.:    :......:.|:
Yeast   848 -----LNSFAPPPNPYATATVPATNVSTTSI----------PQNTFAPIQPGMPIMGDYNAQSSS 897

  Fly  7343 LPSRSTDRTTPSESPETP-------TTLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPASLE 7400
            :||:........::|...       ..||.....:|      ...:.|....|...|||:|.:  
Yeast   898 IPSQPPINAVSGQTPHLNRKANDGWNDLPLKVKEKP------SRAKAVSVAPPNILSTPTPLN-- 954

  Fly  7401 TTVPSVTLETTTSVPMGSTGGQVTGQTTAPP----SEVRTTIRVEESTLPSRSTDRTPPSESPET 7461
             .:|:....|....|:......|: ..:.||    |.|.:.:...||...|.|....||..|.:.
Yeast   955 -GIPANAASTMPPPPLSRAPSSVS-MVSPPPLHKNSRVPSLVATSESPRASISNPYAPPQSSQQF 1017

  Fly  7462 PTTLPSDFTTRPHSDQTTESSRDVPTTQ-----PFESSTPRPVTLEIAVPPVTSETTTNVPIGS- 7520
            |....|......::.|...|:...|..|     |.....| |..|..|..|. :.|.|..|.|| 
Yeast  1018 PIGTISTANQTSNTAQVASSNPYAPPPQQRVATPLSGGVP-PAPLPKASNPY-APTATTQPNGSS 1080

  Fly  7521 ---TGGQVTGQTTATPSEV--RTTIGVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHSDQT 7580
               ||......|..:|..|  :...|....::..||....:..::|....|.|...::.....|.
Yeast  1081 YPPTGPYTNNHTMTSPPPVFNKPPTGPPPISMKKRSNKLASIEQNPSQGATYPPTLSSSASPLQP 1145

  Fly  7581 TESTRDVPTTRPFEASTPS-------PASLETTVPSVTLETTTNVPIGSTGGQVTGQTTATPSE 7637
            ::     |.|...:.:|.:       ||..:..|..:..|.....|:             ||.|
Yeast  1146 SQ-----PPTLASQVNTSAENVSHEIPADQQPIVDFLKEELARVTPL-------------TPKE 1191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395 114/607 (19%)
DUF4758 6662..6839 CDD:292572 28/176 (16%)
DUF4758 6764..6941 CDD:292572 38/199 (19%)
DUF4758 6866..7045 CDD:292572 44/288 (15%)
DUF4758 6968..7179 CDD:292572 54/302 (18%)
DUF4696 7024..7569 CDD:292395 132/636 (21%)
DUF4758 7172..7383 CDD:292572 42/222 (19%)
DUF4696 7330..7964 CDD:292395 68/341 (20%)
DUF4758 7400..7587 CDD:292572 44/201 (22%)
DUF4758 7538..7707 CDD:292572 18/107 (17%)
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
SEC31NP_010086.2 WD40 repeat 12..61 CDD:293791 6/23 (26%)
WD40 17..327 CDD:421866 69/362 (19%)
WD40 repeat 66..106 CDD:293791 8/45 (18%)
WD40 repeat 111..154 CDD:293791 8/48 (17%)
WD40 repeat 164..200 CDD:293791 3/36 (8%)
WD40 repeat 212..253 CDD:293791 16/75 (21%)
WD40 repeat 260..297 CDD:293791 9/47 (19%)
WD40 repeat 303..327 CDD:293791 5/30 (17%)
PHA03247 <772..1172 CDD:223021 97/459 (21%)
Sec31 899..946 CDD:402928 8/52 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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