DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and nell2a

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001073544.1 Gene:nell2a / 790930 ZFINID:ZDB-GENE-030131-7972 Length:811 Species:Danio rerio


Alignment Length:814 Identity:195/814 - (23%)
Similarity:263/814 - (32%) Gaps:331/814 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 TC-TCFPGYRGNGFH--CEDIDECQDPAIAARCVENAECCNLPAHFLCKCKDGYEGDGEVLCTDV 213
            || ||      |.||  .:.|.|.||  |.|:.......                  .|...:.:
Zfish   224 TCPTC------NDFHGLVQKIMELQD--ILAKTSSKLSL------------------AEEKMSGL 262

  Fly   214 DECRNPENCGPNALCTNTPGNYTCSCPDG-YVGNNPYREGCQDVDECSYPNVCGPGAICTNLEGS 277
            |.|          .|..     ||...|. |.....:.:||::               ||...|:
Zfish   263 DSC----------YCER-----TCRVKDQIYREEQSWTDGCKN---------------CTCSNGT 297

  Fly   278 YRCD---CPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLCPDG-----YSGDPMN 334
            .||:   |||            :|                         ||||     .:|....
Zfish   298 VRCEKILCPP------------LD-------------------------CPDGTTPAYVTGTCCK 325

  Fly   335 GCEDV-----------DECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQ 388
            .|:.:           ..||.::|.||   |    ..||||                     .:.
Zfish   326 ECQPMCLFSEQTLVEGQSCAVHHPSGL---C----QLFQCR---------------------DRT 362

  Fly   389 LGYGPGATDIAPYQRTSGAGLACLDIDE----------CNQPDGVAK---CGTNAKCINFPGSYR 440
            :...|||.|.        ..|:|.:.|:          |...|..|:   |..|:.|:|......
Zfish   363 MHRVPGAEDC--------PALSCAESDQITLTDRCCRVCRGHDFCAEENICSENSDCVNLDAGAS 419

  Fly   441 CLCPSGFQ----GQGYLHCENINECQD--NPCGENAICTDTVGSFVCTCKPDYTG----DPFRGC 495
            |.|.:||:    ...|  ||:|:||.:  :.|.||..|.:|.|||:|.|   :||    |.: .|
Zfish   420 CGCKNGFRPLRLDSAY--CEDIDECAEGRHYCRENTECVNTAGSFMCVC---HTGFIRIDDY-SC 478

  Fly   496 VDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAEC 560
            .:.|||.:....|.::|:|.|||.|::|.|..||.|.   ...|     ..||...  |.|...|
Zfish   479 TEHDECASGQHDCDENALCFNTVGGHSCSCKPGYSGN---GTVC-----RALCDGR--CLNGGSC 533

  Fly   561 IE-NQCFCLDGFEPIGSSC-VDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQ 623
            .. |.|.|:.||.  |.:| .|||||......|..||.|:|.||.|.|||..||           
Zfish   534 ASPNVCVCVQGFS--GQNCETDIDECSEGLVQCAAHATCVNLPGWYHCECRDGY----------- 585

  Fly   624 PCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNSA 688
                           ..||.:           |.....|.|||||....   .:|..:..|.|..
Zfish   586 ---------------HDNEVF-----------SANGESCRDIDECRTGR---STCANDTVCFNLD 621

  Fly   689 GGFTCACPPGF--SGDPHSKCV--------------DVDECRTGASKCGAG-AECVNVPGGGYTC 736
            |||.|.||.|.  |||    |:              |.|.|  ....|..| .:|..:     .|
Zfish   622 GGFDCRCPHGHNCSGD----CIHNSRVRHNAQIWVLDTDHC--SVCSCQEGQVKCRRM-----VC 675

  Fly   737 RCPGNTIADPDPSVRCVPIVSCSANEDC----------PGNSICDATKRCLCPEPNIGNDCRHP- 790
            .|...|:     .|.|.|.........|          .|::..|:.:||.|.:..:  || .| 
Zfish   676 DCENPTV-----DVLCCPECDPRLTSQCLHQNGLLTYSSGDTWIDSCQRCQCLQGEV--DC-WPL 732

  Fly   791 -CEALNCGAHAQCMLANGQAQCLCAPGYTGNSALAGGCNDIDECRANPCAEKAICSNTA------ 848
             |..::|..   .::..|:    |.|                .|.::||...|:.|:.:      
Zfish   733 SCPPVDCDF---TLVPEGE----CCP----------------RCVSDPCQAHAVRSDISKTCIDE 774

  Fly   849 --------------GGY--LCQCPGG---SSGDP 863
                          |.:  ||||..|   .|.||
Zfish   775 HGITRFSGSAWVKHGTHCTLCQCKNGHVCCSVDP 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 7/16 (44%)
EGF_CA 212..247 CDD:238011 7/35 (20%)
EGF_CA 255..>286 CDD:214542 8/33 (24%)
EGF_CA 298..331 CDD:238011 5/37 (14%)
EGF_CA 338..373 CDD:238011 10/45 (22%)
EGF_CA 413..456 CDD:238011 13/59 (22%)
EGF_CA 457..490 CDD:238011 15/38 (39%)
EGF_CA 497..>529 CDD:214542 12/31 (39%)
EGF_CA 580..>612 CDD:214542 16/31 (52%)
EGF_3 676..702 CDD:289699 11/27 (41%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
nell2aNP_001073544.1 LamG 40..211 CDD:304605
VWC 271..327 CDD:302663 19/107 (18%)
EGF_CA 438..>470 CDD:284955 14/34 (41%)
EGF_3 484..519 CDD:289699 13/37 (35%)
EGF_CA 553..587 CDD:214542 18/59 (31%)
EGF_CA 600..>631 CDD:284955 14/33 (42%)
VWC 638..690 CDD:302663 13/63 (21%)
VWC 707..753 CDD:302663 13/71 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12107
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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