DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Nolc1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_074060.2 Gene:Nolc1 / 64896 RGDID:621578 Length:704 Species:Rattus norvegicus


Alignment Length:778 Identity:157/778 - (20%)
Similarity:264/778 - (33%) Gaps:203/778 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  4810 TTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTL 4874
            |..|.|.|:  :|.|:..   :..::|:||.|...::...:::.:|::.|      .:|....:|
  Rat    61 TKAPKVKLQ--SNGPVAK---KAKKETSSSDSSEDSSEEEDKAQVPTQKA------AAPAKRASL 114

  Fly  4875 PSDFITRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTT 4939
            |.      |:.|..             |....|:|.|.:......|.....|:        :|..
  Rat   115 PQ------HAGKAA-------------AKASESSSSEESSEEEEEEDKKKKPV--------QQKA 152

  Fly  4940 SSP--SEVRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHSEQTTESTRDVPTTRPF 5002
            ..|  ..||...:..||:  ...:|.::..|:|:         |.:|.:..|....       |.
  Rat   153 VKPQAKAVRPPPKKAESS--ESESDSSSEDEAPQ---------TQKPKAAATAAKA-------PT 199

  Fly  5003 EASTPSPASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTT 5067
            :|.|.:||  :...|:.......|...||:....:..::....|.:......:.|.|.:......
  Rat   200 KAQTKAPA--KPGPPAKAQPKAANGKAGSSSSSSSSSSSDDSEEEKKAAAPLKKTAPKKQVVAKA 262

  Fly  5068 PSESPETPTTLPSDFITRTYSDQTTESTRDVPTTRPFE------ASTPSPASLETTVPSVTSETT 5126
            |.:....||       .::.|.:.:.|..:....:|.:      :|.| |.|:..:..||.::: 
  Rat   263 PVKVTAAPT-------QKSSSSEDSSSEEEEEQKKPMKKKAGPYSSVP-PPSVSLSKKSVGAQS- 318

  Fly  5127 TNVPIGSTGGQVTGQTTAPPSEFRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHSD 5191
               |..:........::|..||...:...||...|:    :|..|::|..|.  |........||
  Rat   319 ---PKKAAAQTQPADSSADSSEESDSSSEEEKKTPA----KTVVSKTPAKPA--PVKKKAESSSD 374

  Fly  5192 QT-TESTRDVPTTRPFEASTPSPASLETTV---PSVTLETTTNVPIGSTGGQVTEQTTSSPSEVR 5252
            .: ::|:.|....:|..| |.||.|.....   |:.....|...|.||.....:.:..||.||..
  Rat   375 SSDSDSSEDEAPAKPVSA-TKSPLSKPAVTPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEE 438

  Fly  5253 TTIRVEESTLPSRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPATRPFEASTPSPASL 5317
            ::...||:|..|                     .|.|.:..|.::...:||.:...|        
  Rat   439 SSSSEEEATKKS---------------------VTTPKARVTAKAAPSLPAKQAPRA-------- 474

  Fly  5318 ETTVPSVTSEATTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSTDRTSPSESPETPTT 5382
                                ||..:..:.||.||      .|:.|.|.....:.:...:...||.
  Rat   475 --------------------GGDSSSDSESSSSE------EEKKTPPKPPAKKKAAGAAVPKPTP 513

  Fly  5383 LPSDFTTRPHSDQTTECTRDVPTTRPFEASTPS-SASLETTVPSVTLETTTNVPIGSTGGQVTEQ 5446
            :.........|..::|.:.:....:|...:||. .|.....||:     :.|   |..|.:..|:
  Rat   514 VKKAAAESSSSSSSSEDSSEEEKKKPKSKATPKPQAGKANGVPA-----SQN---GKAGKESEEE 570

  Fly  5447 TTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTRPFE 5511
                          ||.|..::.|..|.|....:          |.|:|     |.|       |
  Rat   571 --------------EEDTEQNKKAAGTKPGSGKK----------RKHNE-----TAD-------E 599

  Fly  5512 ASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEFRTTIRVEESTLPSRSADRT 5574
            |:||.|       ..|.|:|....|....|    |:..|||  || .:|.||..:.||.||.:
  Rat   600 AATPQS-------KKVKLQTPNTFPKRKKG----EKRASSP--FR-RVREEEIEVDSRVADNS 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572 10/36 (28%)
DUF4758 4785..4964 CDD:292572 30/155 (19%)
DUF4696 4841..5385 CDD:292395 102/555 (18%)
DUF4758 4887..5098 CDD:292572 35/212 (17%)
DUF4758 5193..5371 CDD:292572 36/181 (20%)
DUF4758 5294..5487 CDD:292572 33/193 (17%)
DUF4758 5445..5650 CDD:292572 35/130 (27%)
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Nolc1NP_074060.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..638 150/762 (20%)
11 X 12 AA approximate repeats of an acidic serine cluster 84..570 115/620 (19%)
PHA03247 <147..561 CDD:223021 98/523 (19%)
SRP40_C 629..701 CDD:398615 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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