DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and crb2b

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001038627.1 Gene:crb2b / 568520 ZFINID:ZDB-GENE-060610-1 Length:1458 Species:Danio rerio


Alignment Length:1779 Identity:402/1779 - (22%)
Similarity:565/1779 - (31%) Gaps:691/1779 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 GCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCF---PGYRGNGFHCEDIDECQDPAIAARCVE 183
            |..|....| .|...||...:.|..||..:.|||.   |.|.|.  :||.:              
Zfish    23 GLFCTVSSE-VCLSSPCQNNSTCVPTLDGYLCTCSSSPPIYTGP--NCERL-------------- 70

  Fly   184 NAECCNLPAHFLCKCKDGYEGDGEVLCTDVDECRNPENCGPNALCTNTPG--NYTCSCPDGYVGN 246
                                         :|.|   ::.|..:.|..|||  ||||.||||:.|.
Zfish    71 -----------------------------LDPC---DSAGCPSTCIATPGSQNYTCLCPDGFSGP 103

  Fly   247 NPYREGC-QDVDECSYPNVC-GPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGR 309
            |     | |:::|| :.|.| |..:.|.:....|.|.||.||.|   ::.|...:| |:..||..
Zfish   104 N-----CTQNINEC-HSNPCSGVRSFCVDGVNGYSCHCPSGYSG---ADCGTRVRD-CSDDPCFN 158

  Fly   310 NADCLNTDGSFRCLCPDGYSGDPMNGC-EDVDECATNNPCGLGAECVNLGGSFQCRCPSGFVLEH 373
            ||.|:.....:.|.|..|:.|   ..| ||:||| .:.||..||.|.:..|.:||.|..||    
Zfish   159 NATCVWAPDGYECHCAAGFRG---RNCEEDIDEC-LSQPCRNGAICQDAVGVYQCYCVPGF---- 215

  Fly   374 DPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLAC-LDIDEC-NQPDGVAKCGTNAKCINFP 436
                                             .|..| :||:|| :||     |..|..|:|..
Zfish   216 ---------------------------------QGFHCEIDINECASQP-----CENNGTCVNGR 242

  Fly   437 GSYRCLCPSGFQGQGYLHCE-NINECQDNPCGENAICTDTVGSFVCTCKPDYTGDPFRGC-VDID 499
            ..|.|.|..||.|   |:|| :::||:.:||...|:|.|.||.:.|.|.|.|.|   ..| :|||
Zfish   243 DRYICECLFGFTG---LNCEVDVDECEASPCQNGAVCHDHVGLYTCECVPGYEG---INCELDID 301

  Fly   500 ECTALDKPCGQHAVCENTVPGYNCKCP-QGYDGKPDPKVACEQVDVNI-LCSSNFDCTNNAECIE 562
            ||.:  .||....||.:.|.||.|.|. .|:.|     ..|   |::| .|||: .|.:.|.|:|
Zfish   302 ECES--SPCRHGGVCLDMVNGYECDCSGTGFMG-----FFC---DIDIPECSSD-PCQHGATCLE 355

  Fly   563 N----QCFCLDGFEPIGSSC-VDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACK 622
            .    .|.|..|:|  |.:| :|:|||                                    ..
Zfish   356 GVNHYTCICWTGYE--GVNCELDVDEC------------------------------------VS 382

  Fly   623 QPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNS 687
            ||||              ||..|       :..||.:...| :.|.|....           ..|
Zfish   383 QPCE--------------NEGQC-------FQRSDSSLYRV-LPELDTDFS-----------FQS 414

  Fly   688 AGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRC 752
            |.|:.|.|..||:|:..|  |:|:||.:        |.|.|   ||                   
Zfish   415 AAGYLCQCVSGFTGENCS--VNVNECES--------APCEN---GG------------------- 447

  Fly   753 VPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCLCAPGY 817
                ||   ||                                        |.|. .||.|.||:
Zfish   448 ----SC---ED----------------------------------------LVNA-FQCSCPPGF 464

  Fly   818 TGNSALAGGC-NDIDECRANPCAEKAICSNTAGGYLCQCPGGSSGD-PYREGCITSKTVGCSDAN 880
            .|     ..| .::|||.::||..:..|.::...|:|.||....|. |:.....:.:..||.| .
Zfish   465 AG-----AVCETELDECESDPCQNRGRCEDSINAYICHCPPAEPGHLPWGGPDCSVQLTGCVD-Q 523

  Fly   881 PCATGETCV------QDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRG---------KPACG 930
            ||....||:      |..:|    |.|..|:    ....||.....|:.||         |....
Zfish   524 PCQNNATCIPSIQHQQHQHT----CRCPSGF----HGTHCQTSTTFSITRGGYLLIDLHHKNNRS 580

  Fly   931 LNALCKNLPGSYECRCP----------QGHNGNPFIMCEICNTPECQCQSP-----YKLVGN--- 977
            ...|..::| |.:.|..          :|...:.|::..|.....|:.||.     .||.|:   
Zfish   581 RRYLDSHVP-SVQLRFRTTLQDGVIFFRGGQNHFFVLELIAGELYCRAQSGDLKLFVKLNGDFGD 644

  Fly   978 -------------SCVLSGCSSGQ---------ACPSGAECISIAG-------------GVSYCA 1007
                         ..|||....|:         ..|.|.|.:.:.|             |...|.
Zfish   645 GFWRGVSVSVDEGLTVLSEGEMGEDGGHNQLLSFQPQGLETLYVGGVPQEWMNLTLSRTGFVGCL 709

  Fly  1008 CPKGYQTQP--DGSCVDVDE----CEER---GAQLCAFGAQCVNKPGSYSCHCPEGYQGD----- 1058
            ......::|  ..|.|.:.|    ||..   ....|:...:||:...:|:|.|...|.|:     
Zfish   710 EDLVVDSEPVLPQSLVPLQEVQMGCERTEWCRVNPCSDHGRCVDLWSNYTCVCHRPYYGEHCSEE 774

  Fly  1059 ---------------AY---------------------NGLCALAQR------------------ 1069
                           |:                     |||....|.                  
Zfish   775 HTSWTFSHERNRSFAAFPIMQNHSRDVTVSLWLRSRHLNGLVLQLQHDNQPYLTLFLKNGSLYIS 839

  Fly  1070 -----KCAADRECAANEKCI-----QPGECVCPPPYFLDPQDNNKCKSPCERFP---CGINAKC- 1120
                 :.|:| .....||..     :||..:.               :..:|.|   .|...:. 
Zfish   840 IYSSIRRASD-FLTNGEKLFMSIKTEPGVILF---------------NQTQRIPMIYSGFEVQVG 888

  Fly  1121 -------TPSDPPQCMCEAGFKG----------------------------------DPLLGCTD 1144
                   .|......:....|||                                  :.|.||..
Zfish   889 DVVYLGGLPEGENSALWGGYFKGCLQDVRIDDTQLFMYSGSISQKPQHANYLPRNSSNVLEGCVG 953

  Fly  1145 EDECSHLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKS--GCIFESGTPKSKCLSNDD---CASNL 1204
            :..|...||..|..|......:.|:||.:::|...::  .|:.:...|:::|:...|   |.:| 
Zfish   954 DQTCKMKPCLNGGKCQVIWNDFMCLCPLNFSGKTCETRVWCVSDPCDPRTRCVDLPDGYECLAN- 1017

  Fly  1205 ACLE---------GSCVSPC-------------SSLLCGSNA---YCETEQHAGWCRCRVGYVKN 1244
            |..|         ||...|.             .::|..||.   :|     .|.....: .||.
Zfish  1018 ATFENNALKFSANGSFFEPVMRISMDLRTREENGTILRSSNGIEFFC-----MGLLNSSI-IVKF 1076

  Fly  1245 GDGDCV---SQCQDVICGDG-----ALCIPTSEGPTCKCPQGQLGNP-----FPGGSCSTDQCSA 1296
            .|.:.:   :...||...||     .|...:|.....:......|||     .|.|:......|.
Zfish  1077 RDSNSLEVHAFISDVTVSDGEWHKVELYASSSRISAFRWHMSIDGNPAGFSLSPAGNVDFFNSST 1141

  Fly  1297 A------RPC-GERQI---------CINGRCKERCEGVVCGIGATCDRNNGKCICEPNFVGNPDL 1345
            .      ..| ||.:|         .:|....::.:.:  .||...:.:.| ||      |:|  
Zfish  1142 VMLAENYTGCLGEVRIGGVHLSFFGPLNEEAPQKTQFI--RIGGMLEPHLG-CI------GSP-- 1195

  Fly  1346 ICMPPIEQAKCSPGCGENAHCEYGLGQSRCACNPGTFGNPYEGCGAQSKNVCQPN--SCGP---- 1404
            :|:        |..|..|..|......:.|.|.||..|..           ||.|  .||.    
Zfish  1196 LCL--------SEPCLNNGTCTDLFNLAVCKCAPGWTGER-----------CQENIDECGEQPCV 1241

  Fly  1405 NAECRAVGNHISCLCPQGFSGNPYIGCQ-DVDECANKPCGLNAACLNRAGGFECLCLSGHAGNPY 1468
            ...|:.:.....|.||.||.|.   .|. :||:|.:..|....:|:....|:.|:||.||.| ||
Zfish  1242 QGSCQDLLGDYECRCPVGFGGK---NCDVEVDQCKDHQCENGGSCVATVSGYTCVCLPGHTG-PY 1302

  Fly  1469 SSCQPIESKFCQDANKCQCNERV---ECPEGYSCQKGQCKNLCSQASCGPRAICDAGNCICPMGY 1530
                              |..|.   ||.....|:.|   .:||:.|.|       .||.|..|:
Zfish  1303 ------------------CRWRFPPRECDVDLQCENG---GVCSEGSWG-------ANCTCRPGF 1339

  Fly  1531 IGDPHDQVHGCSIRGQCGNDADCLHSEICFQLGKGLRKCVDACSKIQCGPNALCVSEDHRSSCIC 1595
            .|          :|  |..|.|...||.|...|.                   ||:..:...|.|
Zfish  1340 TG----------VR--CELDIDECVSEPCLNGGS-------------------CVNRHNLYFCEC 1373

  Fly  1596 SDGFFGNPSNLQVGCQPERTVPEE 1619
            ...|.|.      .||..:.:.:|
Zfish  1374 LPDFSGE------NCQITKQLQQE 1391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 11/31 (35%)
EGF_CA 212..247 CDD:238011 16/36 (44%)
EGF_CA 255..>286 CDD:214542 10/31 (32%)
EGF_CA 298..331 CDD:238011 10/32 (31%)
EGF_CA 338..373 CDD:238011 15/34 (44%)
EGF_CA 413..456 CDD:238011 17/43 (40%)
EGF_CA 457..490 CDD:238011 13/32 (41%)
EGF_CA 497..>529 CDD:214542 14/32 (44%)
EGF_CA 580..>612 CDD:214542 4/31 (13%)
EGF_3 676..702 CDD:289699 7/25 (28%)
EGF_CA 1022..1056 CDD:214542 9/40 (23%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
crb2bNP_001038627.1 EGF_CA 108..144 CDD:238011 13/39 (33%)
EGF_CA 152..183 CDD:238011 9/33 (27%)
EGF_CA 185..221 CDD:238011 16/73 (22%)
EGF_CA 223..259 CDD:238011 17/43 (40%)
EGF_CA 261..297 CDD:238011 14/38 (37%)
EGF_CA 299..335 CDD:238011 16/42 (38%)
EGF_CA 338..374 CDD:238011 13/38 (34%)
EGF_CA 434..470 CDD:238011 20/118 (17%)
EGF_CA 474..>500 CDD:214542 9/25 (36%)
LamG 590..715 CDD:238058 21/124 (17%)
EGF_CA <743..771 CDD:238011 8/27 (30%)
LamG 784..919 CDD:238058 18/150 (12%)
EGF 957..987 CDD:278437 9/29 (31%)
Laminin_G_2 1044..1160 CDD:280389 24/121 (20%)
EGF 1197..1227 CDD:278437 10/37 (27%)
EGF_CA 1231..1265 CDD:238011 10/36 (28%)
EGF_CA 1269..1303 CDD:238011 14/52 (27%)
EGF_CA 1347..1383 CDD:238011 12/60 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.