DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and bcar1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_021323361.1 Gene:bcar1 / 568309 ZFINID:ZDB-GENE-030131-2774 Length:961 Species:Danio rerio


Alignment Length:485 Identity:117/485 - (24%)
Similarity:156/485 - (32%) Gaps:185/485 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly 18785 QQQQPGIVNIPSAPQPIYPTPQS--------PQYNVNYPSPQP---ANPQKP-GVVNIPSVPQPV 18837
            |||...:.|.||..|.:...|||        .||...:|:..|   ||...| ||..:|      
Zfish   114 QQQLQQLANQPSPTQSLINLPQSAYNKIPPAAQYTAMHPAFTPSGSANSTNPDGVYMLP------ 172

  Fly 18838 YPSPQPPVYDVNYPTTPVSQHPGVVNIPSAPRLVPPTSQRPVFITSPGNLSPTPQPGVINIPSVS 18902
             ||....:|.|                ||.|                    |||||         
Zfish   173 -PSHGSSLYQV----------------PSGP--------------------PTPQP--------- 191

  Fly 18903 QPGYPTPQSPIYDANYPTTQSPIPQQPGVVNIPSVPSPSYPAPNPPVNYPTQPSPQIPVQPGVIN 18967
            ||..|..........||.|...:.|.|                 |.:|.|.|...|:|...|. .
Zfish   192 QPKAPALAKKQTHVQYPPTTQDVYQVP-----------------PSINAPGQDIYQVPPAAGG-Q 238

  Fly 18968 IPSAPLPTTPP---------QHPPVFIPSPESPSPAPKPGVINIPSVTHPEYPTSQVPVYDVNYS 19023
            .|...:...||         |.||....|.:||.|.   |.:.:|:      ...||.|||...:
Zfish   239 CPGQDVYQVPPSVNQTQDVYQIPPSLDRSWDSPKPM---GKVVVPT------RVGQVYVYDTGKN 294

  Fly 19024 -----TTPSPIPQKPGVVNIPSAPQPVHPAPNPPVHEFNYPTPPAVPQQPGVLNIPS----YPTP 19079
                 ..|..:|....:.::|       |.....:.:. |.|||...:.|     ||    |.||
Zfish   295 EQDEYDVPRHLPPSQDIYDVP-------PTRTQYIQQV-YDTPPMAMKGP-----PSGQEIYDTP 346

  Fly 19080 VAPTPQSPIYIPSQEQPKPTTRPSVINVPSVPQPAYPTPQAPVYDVNYPTSPSVIPH-------- 19136
                       ||.::.:...:.:|.::|  |..:...|..|:.:..|    .|.||        
Zfish   347 -----------PSVDKSQLHYQQTVYDIP--PSVSKDVPDGPIREETY----DVPPHFAKMKSLE 394

  Fly 19137 ---QPGVVNIPSVPLPAPPVKQRPVFVPSPVHPTPAPQ---------PGVVNIPSV-----AQPV 19184
               |..:..||..  |.||       :|..|:..|.||         ..:.:||:.     .|..
Zfish   395 NQNQAYLSQIPGG--PEPP-------IPEDVYDVPPPQLIGKRQPEGQEIYDIPASLRKGGPQDH 450

  Fly 19185 HPT--YQPPVVERPA-------IYDVYYPP 19205
            |||  |..| .||||       :|||  ||
Zfish   451 HPTDVYDFP-RERPAGEDSGDYVYDV--PP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883 19/58 (33%)
Med25_SD1 18795..18955 CDD:288132 39/171 (23%)
MISS 19026..19258 CDD:292450 53/218 (24%)
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
bcar1XP_021323361.1 SH3_BCAR1 46..112 CDD:212934
EBV-NA3 <123..254 CDD:332796 46/200 (23%)
Serine_rich_BCAR1 530..686 CDD:211406
PLC-beta_C <764..815 CDD:312287
FAT-like_CAS_C 827..958 CDD:325950
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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