DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and thbs2b

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_009305066.1 Gene:thbs2b / 566325 ZFINID:ZDB-GENE-100623-1 Length:1181 Species:Danio rerio


Alignment Length:1037 Identity:220/1037 - (21%)
Similarity:309/1037 - (29%) Gaps:395/1037 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QPFKTNLRA-------------NSRFRG------EVFYLNLEN--GYFGC---------QVNEST 62
            :||..:|.|             .|.|||      .:|...||:  ...||         :|:||.
Zfish   182 EPFYEHLSATGASMFVAKGSTRESHFRGLLQNVRFIFDTQLEDILESRGCDLGNPVEANKVSESA 246

  Fly    63 EYLQLFNLSKLCDGT--QDCFLGADELSKELKCTNDCDK--------DGTKCTHGACLNGVCHCN 117
            |::::  .|.:....  |:..:.|.. |.||.|...|::        .|.:......::|:    
Zfish   247 EFVEV--PSSIATNVIGQNTDVPATS-SSELMCERSCEELANLFQELKGLRVVVSNLIDGL---- 304

  Fly   118 DGYGGCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCED---IDECQDPAIAA 179
                  ..|.::....|:        ..|.:.|.:........|..|..::   :|.|..     
Zfish   305 ------QKVTEENTAMKE--------ALNKMQSLSEQSMCWQDGRMFEDKEDWIVDSCTK----- 350

  Fly   180 RCVENAECCNLPAHFLCKCKDGYEGDGEVLCTDVDECRNPE----NCGPNALCTNTPGNYTCSCP 240
                            |.|::|.....::.|..| .|.||.    .|.|           .|...
Zfish   351 ----------------CTCQEGKVVCRQITCPPV-ACANPSFIDGECCP-----------VCLPM 387

  Fly   241 DGYVGNNPYREGCQDVDECSYPNVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECART 305
            |...|.:|:.|..|    |:.  .||.|   |...|. .||     |.........:...:|:..
Zfish   388 DSEDGWSPWSEWTQ----CTV--TCGSG---TQQRGR-SCD-----DTSNTCSGPSIQTRKCSLG 437

  Fly   306 PCGRNADCLNTDGSFRCLCPDGYS-GDPMNGCE---------DVDECATNNPCGLGAECVNLGGS 360
            .|.|.   :..||        |:| ..|.:.|.         .:..|....|...|.:|...|..
Zfish   438 KCDRR---VRQDG--------GWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQRGGKDCEGEGRE 491

  Fly   361 FQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPD---G 422
            .| .|          |.|  |.|::.   |:||. :..|....|.|.||.. .:.|||.|:   |
Zfish   492 TQ-SC----------HTD--PCPIDG---GWGPW-SPWAACSATCGGGLKS-RVRECNSPEPQHG 538

  Fly   423 VAKC-G---TNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDNPCGENAIC-TDTVGSFVC- 481
            ..|| |   .|..|      .|..||             |:.|..|||.....| |.:.||:.| 
Zfish   539 GRKCLGDSIENEVC------NRLECP-------------IDGCLSNPCFSGVECNTASDGSWECG 584

  Fly   482 TCKPDYTGDPFRGCVDIDECTALDKPCGQHAV-----CENTVPGYNC-KCPQGYDGKPDPKVACE 540
            .|...|.|:. ..|.|::||..:...|  |.|     |.||.||::| .||..|.|.....:..|
Zfish   585 PCPNGYRGNG-TSCEDVNECNMVSDLC--HKVGGLQQCVNTDPGFHCLPCPPRYKGTQPYGMGVE 646

  Fly   541 QVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCL----NTP 601
            ...           ||...|           ||       .:.|:.::..|...|:|:    .|.
Zfish   647 SAK-----------TNKQVC-----------EP-------YNPCKDNSHSCHKFAECIFLSHFTD 682

  Fly   602 GSYGCECEAGYVGSPPRMACKQ-------PCEDVRCGAHA--YCKPD-----------------Q 640
            ..|.|||..||.|.  .:.|.:       |.:|:.|||:|  :||.|                 |
Zfish   683 PMYKCECRIGYAGD--GIICGEDFDLDGWPNQDLVCGANATYHCKKDNCPTLPNSGQEDFDNDGQ 745

  Fly   641 NEAYCVCEDG-------------------WTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTN 686
            .:| |..:|.                   :.|:..||...|   |.|...|.|    .|..|..|
Zfish   746 GDA-CDKDDDNDEIVDERDNCPLMYNPRQYDYDKDDVGDRC---DNCPYEHNP----AQTDTDNN 802

  Fly   687 SAGGFTCACPPGFSGD--------------PHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCR 737
            ..|.   ||.....||              ...|..|:|         |.|.:|.|.|    ...
Zfish   803 GEGD---ACSVDMDGDEILNERDNCPLIYNTDQKDTDLD---------GVGDQCDNCP----LVH 851

  Fly   738 CPGNTIADPDPSVRCVPIV--SCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHA 800
            .|..|.:|.|       :|  .|..|:|                   |..|              
Zfish   852 NPQQTDSDND-------LVGDQCDNNQD-------------------IDED-------------- 876

  Fly   801 QCMLANGQAQCLCAPGYTGNSALAGGCNDIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDP-Y 864
                                    |..|::|.|...|.|.:|.......|..|.....:.|.| .
Zfish   877 ------------------------GHQNNMDNCPYIPNANQADHDGDGKGDACDFDDDNDGIPDD 917

  Fly   865 REGCITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDV-DECSVQRG 925
            |:.|.........|::....||.|                 |.:.:|....|: |.|....|
Zfish   918 RDNCRLVPNKDQEDSDGDGRGEAC-----------------ENDFDNDNVPDIFDACPENSG 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 4/28 (14%)
EGF_CA 212..247 CDD:238011 9/38 (24%)
EGF_CA 255..>286 CDD:214542 8/30 (27%)
EGF_CA 298..331 CDD:238011 7/33 (21%)
EGF_CA 338..373 CDD:238011 7/34 (21%)
EGF_CA 413..456 CDD:238011 13/49 (27%)
EGF_CA 457..490 CDD:238011 12/34 (35%)
EGF_CA 497..>529 CDD:214542 14/37 (38%)
EGF_CA 580..>612 CDD:214542 9/35 (26%)
EGF_3 676..702 CDD:289699 6/25 (24%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
thbs2bXP_009305066.1 TSPN 25..220 CDD:214560 9/37 (24%)
VWC 330..384 CDD:278520 14/86 (16%)
TSP_1 394..439 CDD:278517 13/59 (22%)
TSP1 449..501 CDD:214559 13/64 (20%)
TSP1 506..558 CDD:214559 18/59 (31%)
EGF_3 661..700 CDD:289699 12/40 (30%)
TSP3 repeat_1C 702..737 CDD:275367 9/34 (26%)
TSP3 repeat_long 738..773 CDD:275366 4/35 (11%)
TSP3 repeat_short 774..796 CDD:275365 8/28 (29%)
TSP_3 798..832 CDD:280556 7/36 (19%)
TSP3 repeat_long 798..832 CDD:275366 7/36 (19%)
TSP3 repeat_short 833..855 CDD:275366 9/34 (26%)
TSP3 repeat_long 856..893 CDD:275365 15/100 (15%)
TSP_3 857..893 CDD:280556 14/99 (14%)
TSP3 repeat_short 894..929 CDD:275366 7/34 (21%)
TSP_3 931..963 CDD:280556 10/49 (20%)
TSP_C 983..1180 CDD:283408
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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