DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and ltbp1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017207300.1 Gene:ltbp1 / 562072 ZFINID:ZDB-GENE-091202-8 Length:1527 Species:Danio rerio


Alignment Length:1216 Identity:318/1216 - (26%)
Similarity:442/1216 - (36%) Gaps:373/1216 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VFYLNLENGYFGCQVNESTEYLQLFNLSKLCDGTQDCFLGADELSKELKCTNDCDKDGT------ 102
            |.|.| :..|.  |....|...||....:...|.| |......|||:..|   |...||      
Zfish   477 VIYPN-QQTYL--QYQPVTSKSQLGRCFQETTGMQ-CGKALPGLSKQDAC---CGTVGTSWGFHK 534

  Fly   103 --KCTHGACLNGVCHCNDGY---GGCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGN 162
              ||.....: .:..|..||   .|..|:|.|  ||:.:......:|.||:||:.|.|.||:..:
Zfish   535 CQKCPKKPSI-PLIECPQGYKRLNGTRCIDID--ECQLQGVCPNGNCINTVGSYRCICNPGFVPD 596

  Fly   163 GFHCEDIDEC--QDPAI------AARCVENAECCNLP-----AHFLCKCKDGYEGDGEVLCTDVD 214
                ..:..|  :.||:      ..|.|.:.:.|..|     :..||.|     ..|:......|
Zfish   597 ----PSLTSCFPETPALREEKGACFRFVGSGKQCLHPVSTQLSKQLCCC-----SVGKAWGPHCD 652

  Fly   215 ECRNPENCGPNALC---------------TNTPGNYTCSCPDGYVGNN----------------- 247
            .|..|.......:|               ...|..:|.:...||  ||                 
Zfish   653 RCPLPGTAAFKDICPGGMGYHVTPPYIYKPKPPNGHTQTDSQGY--NNPTIRHQVPMDPPVPFPT 715

  Fly   248 -------------------------------PYREGCQD--------VDECSY-PNVCGPGAICT 272
                                           |..|| ||        :|||.. |::||.| ||.
Zfish   716 LQQPVEALSITERQLPEVVEKVSPPAPVAIPPSNEG-QDITPTQLAEIDECVVRPDICGAG-ICY 778

  Fly   273 NLEGSYRCDCPPGY--DGDGRSESGCVDQDECARTP--CGRNADCLNTDGSFRCLCPDGY-SGDP 332
            |...||.|.|..||  |.:|.:   |||.||||..|  |. |..|.||.|.|.|:|..|: ..:.
Zfish   779 NTAESYTCFCDDGYRTDSEGTT---CVDVDECAENPSLCA-NGRCQNTPGGFLCVCELGFMPNER 839

  Fly   333 MNGCEDVDECATNNPCGLGAECVNLGGSFQCR-CPSGFVLEHDPHADQLPQPLNTQQLGYGPGAT 396
            .:.|.|:|||.....|..|. |.|..|||.|. ||.||                           
Zfish   840 GSSCSDIDECQNRRACPSGL-CYNTLGSFMCSPCPDGF--------------------------- 876

  Fly   397 DIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGF----QGQGYLHCEN 457
                    .|....|:||:||..    .:...:.:|.|..|.:.|.|..||    .|:.   |.:
Zfish   877 --------EGKNGQCVDINECLD----KRVCAHGQCSNLEGYFVCTCDEGFLPTPDGKS---CTD 926

  Fly   458 INECQDNPCGENAICTDTVGSFVCTCKPDY----TGDPFRGCVDIDECTALDKPCGQHAVCENTV 518
            |:||||:.......|.:|.|||:|.|:|.:    :||.   |.|:|||..:.:.|.....|.|.:
Zfish   927 IDECQDDNVCIQGHCQNTQGSFICNCEPGFKLSSSGDQ---CEDVDECLVIPQTCDGVGQCVNIL 988

  Fly   519 PGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDIDE 583
            ..|.|.|||||          .||:                               .:||:|:||
Zfish   989 GSYQCNCPQGY----------RQVN-------------------------------STSCLDVDE 1012

  Fly   584 CRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCE 648
            |....::|.|:.:||||.||:.|.|:||:|.:                                 
Zfish  1013 CEDDTQLCIPNGECLNTEGSFLCVCDAGFVST--------------------------------- 1044

  Fly   649 DGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSK-CVDVDE 712
                      ..||.|:|||.:..   .:||.:.||.|:.|.|.|.|.|||......: ||||:|
Zfish  1045 ----------RTGCQDVDECSLNE---NTCGSHGTCQNTIGSFICQCDPGFKDSQDGQGCVDVNE 1096

  Fly   713 CRTGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSV-RCV--PIVSCSANEDCPGN----SIC 770
            |....:.||. |.|.| ..|.:.|.|| :.:.:.||.: :|:  |.|:....::|..|    ::|
Zfish  1097 CELLGNVCGE-ATCEN-REGTFLCLCP-DDLQEFDPMLGKCISTPPVTTVERKECYFNLNDENLC 1158

  Fly   771 D-------ATKRCLCP-EPNIGNDCR-HPCEALNCGAHAQCMLANGQAQCLCAPGYTGNSALAGG 826
            |       ..:.|.|. ....|::|. |||........:| |...|:...:.....:..|:||..
Zfish  1159 DKVLASSMTKEECCCTLGAGWGDNCEVHPCPIPGTDQFSQ-MCPAGRGYLISGDPMSTTSSLAEN 1222

  Fly   827 CN-DIDECR--ANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSDANPCATGETC 888
            .. |.|||:  .:...:...|.||||.|.|.|..|...|..:..|:  .|..|.|...|..|| |
Zfish  1223 TKADADECQLFGSEICKDGFCLNTAGWYECYCKSGLYYDESKLQCL--DTDECQDEAKCRDGE-C 1284

  Fly   889 VQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGL-------NALCKN-LPGSY--- 942
            : ::| |:..|.|........:|..|...|...........|:       |..|.| :|..:   
Zfish  1285 M-NTY-GSYQCFCTPPMVLAMDNTHCILPDVAGQSEADLYSGVCWERVTENFSCANPIPNIHTSF 1347

  Fly   943 -ECRCPQGHN-GNPFIMC---------EICN-----------------TPECQCQ---------- 969
             ||.|..|.. ||...:|         ::||                 :|:...|          
Zfish  1348 TECCCLYGEAWGNDCALCPGKNTDSYAQMCNIRRPYGRDALVAGPIGVSPDYNPQPLNPDGTLPY 1412

  Fly   970 --------SPYK----LVGNSC-VLSGCSSGQACPSGAECISIAGGVSYCACPKGYQTQPDG-SC 1020
                    :||.    |....| ||:||.:|:       |:.:..|.: |.|..||...... :|
Zfish  1413 IEDYDEPRNPYDAFEGLRAEECGVLNGCENGR-------CVRVQEGYT-CDCFDGYTLDMSRMAC 1469

  Fly  1021 VDVDECEERGAQ--LCAFGAQCVNKPGSYSCHCPEGYQGDAYNGLC 1064
            ||::||.|..|:  ||..| .|:|..|||.|.|..|:...|.:..|
Zfish  1470 VDINECSELNAKMSLCKNG-NCINTQGSYKCVCLPGFILSAQHNYC 1514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 9/28 (32%)
EGF_CA 212..247 CDD:238011 8/49 (16%)
EGF_CA 255..>286 CDD:214542 15/39 (38%)
EGF_CA 298..331 CDD:238011 16/35 (46%)
EGF_CA 338..373 CDD:238011 16/35 (46%)
EGF_CA 413..456 CDD:238011 12/46 (26%)
EGF_CA 457..490 CDD:238011 13/36 (36%)
EGF_CA 497..>529 CDD:214542 12/31 (39%)
EGF_CA 580..>612 CDD:214542 15/31 (48%)
EGF_3 676..702 CDD:289699 12/25 (48%)
EGF_CA 1022..1056 CDD:214542 16/35 (46%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
ltbp1XP_017207300.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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