DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and hmcn1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_005160777.1 Gene:hmcn1 / 559150 ZFINID:ZDB-GENE-041014-322 Length:5623 Species:Danio rerio


Alignment Length:1115 Identity:253/1115 - (22%)
Similarity:336/1115 - (30%) Gaps:457/1115 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KLCDGTQDCFLGAD--------ELSKELKCTNDCDKDGTKCTHGACLNGVCHCNDG--------- 119
            :||:.....|.|..        ::..|..|..| .|..:..:.|||   ...|..|         
Zfish  4653 RLCNNPPPSFEGPSCEGPDTQTQVCNERNCPVD-GKWSSWVSWGAC---SVSCGGGTRQRTRICA 4713

  Fly   120 -----YGGCNCVDKD--ENECKQRPCDVFAHC--TNTLGSFTCTCFPGYRGNGFHCEDIDECQDP 175
                 :||..|...|  .:.|...||.:..:.  .|:.||.:.||      ||........|.:|
Zfish  4714 NPTPQHGGRQCEGNDIHIDFCNNEPCPIHGNWGPWNSWGSCSRTC------NGGQMRRYRTCDNP 4772

  Fly   176 AIAARCVENAECCNLPAHFLCKCK------DG----YEGDGE--VLC-----TDVDECRNPENCG 223
                |.......|......:.||.      ||    :|..||  ..|     |.|..|.:|....
Zfish  4773 ----RPANGGRACTGSDSQIQKCNTANCPVDGKWSSWESWGECSASCGGGERTRVRLCNSPSPSN 4833

  Fly   224 PNALCTNTPGNYT----CS---CPDG-------YVGN-NPYREGCQDVDE--------------- 258
            ....|   ||:.|    |:   ||.|       .:|| |....|...::.               
Zfish  4834 SGRPC---PGDSTQLSRCNLQPCPGGPQKARGSIIGNINDVEFGISILNATITSSSTGGKVIQAT 4895

  Fly   259 -CSYPNVCGPG---------------------AI--CTNLEGSYRCD---------------CPP 284
             .:.|...||.                     |:  .|..:|.:|.:               ...
Zfish  4896 ITNIPRSLGPAMRKLISILNPIYWTTAHELGEAVNGFTLTDGIFRRETQVEFATGEILRMTHVAR 4960

  Fly   285 GYDGDGRSESGCVDQDECARTPCGRNADCLNTD----------GSFRCL---------------- 323
            |.|.||......|......:.|  .|||....|          |....|                
Zfish  4961 GLDSDGALLLDIVVNGHILQLP--SNADISLKDYTEDYIQTGPGQLYALSTRMFSIDRVSVPYSW 5023

  Fly   324 ----------------------------------------------------CPDGYSGDPMNG- 335
                                                                ||.|:..||... 
Zfish  5024 NHTITYGPSRGKMPYLVQTLHASAINALYHPLEEMLEFAIQATIAKGERSNQCPSGFQLDPTGPY 5088

  Fly   336 CEDVDECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAP 400
            |.|.:||...|||  ...|.|..|::.|.||.|..:..|                          
Zfish  5089 CSDENECVEGNPC--SHACHNAIGTYYCSCPRGLTISAD-------------------------- 5125

  Fly   401 YQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCL--CPSGFQ--GQGYLHCENINEC 461
                   |..|.|||||:.  |...|.....|.|..|||||:  |..||:  ..| |.|.::|||
Zfish  5126 -------GRTCQDIDECSL--GGHMCHDGQDCENTIGSYRCVMRCGRGFRRTADG-LSCSDVNEC 5180

  Fly   462 QD-NPCGENAICTDTVGSFVCTCKPDYTGDPFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKC 525
            |: |||.::  |.:|:|||.|.|:|.|.... |.|:||:||.  .:.|.....|:||..||.|  
Zfish  5181 QESNPCHQH--CLNTIGSFRCACEPGYQLRN-RRCIDINECK--QRVCRSDQQCKNTRGGYTC-- 5238

  Fly   526 PQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEV 590
                            :|   ||.:......|                  .:|:|||||......
Zfish  5239 ----------------ID---LCPTGMTKGGN------------------GTCIDIDECHDGTHQ 5266

  Fly   591 CGPHAQCLNTPGSYGCECEAGY----VGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCEDGW 651
            |..:..|.||.|||.|.|..||    ||.|                                   
Zfish  5267 CRYNQICENTRGSYHCTCPRGYRSQGVGRP----------------------------------- 5296

  Fly   652 TYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTG 716
                      |:||:||:::..|   |...  |.||.|.:.|.||||..             ..|
Zfish  5297 ----------CLDINECELVPVP---CAYQ--CVNSPGSYKCLCPPGLH-------------LLG 5333

  Fly   717 ASKCGAGAECVNVPG---GGYTCRCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCLC 778
            ..|..||.|  .:|.   ..|..|...::........|...:.|.|.:...|             
Zfish  5334 DGKSCAGLE--RLPSYETFSYGYRTSQSSSDRSSYLQRYHSLTSQSYHSYVP------------- 5383

  Fly   779 PEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCLCAPGY-TGNSALAGGCNDIDEC-RANPCAEK 841
                  |..||.....|....     .|.::..:|..|: |.|    |.|.||:|| :.:.|..:
Zfish  5384 ------NGGRHVANRPNSAPS-----RNRRSTYICPHGFKTKN----GHCLDINECEQRDTCQHE 5433

  Fly   842 AICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYE 906
              |.||.|.:.|.||.|     ||  .:|:             |:|                   
Zfish  5434 --CMNTPGSHRCLCPSG-----YR--LMTN-------------GKT------------------- 5457

  Fly   907 RNSENGQCQDVDECSVQRGKPACGLNALCKNLPGSYEC---RCPQGHNGNPFIMCEICNTP---- 964
                   |||:|||..|..:  ||.|.:|.|:.|||:|   .||..:..:|.....:.|.|    
Zfish  5458 -------CQDIDECLEQNIQ--CGANRMCFNMRGSYQCIDTPCPPNYQRDPATGFCLKNCPPNDL 5513

  Fly   965 ECQCQSPYKL 974
            || ..|||.|
Zfish  5514 EC-ALSPYAL 5522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 9/30 (30%)
EGF_CA 212..247 CDD:238011 13/49 (27%)
EGF_CA 255..>286 CDD:214542 7/84 (8%)
EGF_CA 298..331 CDD:238011 10/110 (9%)
EGF_CA 338..373 CDD:238011 13/34 (38%)
EGF_CA 413..456 CDD:238011 19/46 (41%)
EGF_CA 457..490 CDD:238011 16/33 (48%)
EGF_CA 497..>529 CDD:214542 11/31 (35%)
EGF_CA 580..>612 CDD:214542 14/31 (45%)
EGF_3 676..702 CDD:289699 10/25 (40%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
hmcn1XP_005160777.1 VWA_2 36..206 CDD:290253
IG_like 443..510 CDD:214653
I-set 514..600 CDD:254352
ig 522..596 CDD:278476
I-set 604..688 CDD:254352
Ig 618..689 CDD:299845
I-set 694..781 CDD:254352
IGc2 708..771 CDD:197706
I-set 785..876 CDD:254352
Ig 789..876 CDD:299845
IG 888..969 CDD:214652
IGc2 895..959 CDD:197706
I-set 973..1060 CDD:254352
Ig 990..1059 CDD:299845
IG 1084..1162 CDD:214652
Ig 1092..1159 CDD:143165
I-set 1166..1251 CDD:254352
IGc2 1179..1241 CDD:197706
I-set 1251..1348 CDD:254352
Ig 1254..1348 CDD:299845
I-set 1360..1441 CDD:254352
IGc2 1367..1431 CDD:197706
I-set 1450..1535 CDD:254352
IGc2 1461..1525 CDD:197706
IG_like 1547..1628 CDD:214653
Ig 1558..1625 CDD:143165
I-set 1641..1722 CDD:254352
Ig 1641..1718 CDD:299845
Ig 1725..1817 CDD:299845
IG 1738..1815 CDD:214652
Ig 1818..1908 CDD:299845
IG 1826..1908 CDD:214652
IG 1922..2001 CDD:214652
Ig 1927..2001 CDD:299845
IG 2014..2093 CDD:214652
IGc2 2019..2083 CDD:197706
Ig 2096..2186 CDD:299845
IG_like 2107..2184 CDD:214653
Ig 2187..2280 CDD:299845
I-set 2197..2277 CDD:254352
Ig 2292..2371 CDD:299845
IG 2292..2369 CDD:214652
I-set 2373..2463 CDD:254352
IGc2 2391..2453 CDD:197706
IG 2476..2556 CDD:214652
IGc2 2484..2546 CDD:197706
IG 2572..2652 CDD:214652
IGc2 2583..2642 CDD:197706
I-set 2670..2751 CDD:254352
IGc2 2678..2741 CDD:197706
IG 2774..2850 CDD:214652
IGc2 2777..2840 CDD:197706
I-set 2864..2945 CDD:254352
Ig 2864..2938 CDD:299845
Ig 2949..3039 CDD:299845
IG_like 2957..3037 CDD:214653
I-set 3051..3132 CDD:254352
IGc2 3059..3122 CDD:197706
I-set 3154..3226 CDD:254352
Ig 3154..3223 CDD:143165
Ig 3229..3323 CDD:299845
I-set 3238..3321 CDD:254352
IG 3335..3415 CDD:214652
Ig 3343..3415 CDD:299845
Ig 3418..3508 CDD:299845
IG 3428..3508 CDD:214652
IG 3520..3601 CDD:214652
Ig <3533..3603 CDD:299845
I-set 3614..3694 CDD:254352
IGc2 3620..3684 CDD:197706
Ig 3697..3787 CDD:299845
IG_like 3704..3785 CDD:214653
Ig 3788..3878 CDD:299845
I-set 3789..3878 CDD:254352
IG_like 3891..3969 CDD:214653
Ig 3899..3968 CDD:299845
IG_like 3979..4060 CDD:214653
Ig 3990..4052 CDD:299845
I-set 4064..4150 CDD:254352
IGc2 4080..4140 CDD:197706
Ig 4161..4241 CDD:299845
IG_like 4161..4241 CDD:214653
I-set 4245..4324 CDD:254352
IGc2 4260..4320 CDD:197706
Ig 4352..4420 CDD:299845
I-set 4425..4511 CDD:254352
Ig 4439..4512 CDD:299845
TSP1 4518..4569 CDD:214559
TSP1 4583..4626 CDD:214559
TSP1 4631..4683 CDD:214559 5/29 (17%)
TSP1 4688..4740 CDD:214559 11/54 (20%)
TSP1 4745..4797 CDD:214559 13/61 (21%)
TSP1 4802..4854 CDD:214559 13/54 (24%)
nidG2 4855..5070 CDD:238158 24/216 (11%)
EGF_CA 5091..5130 CDD:214542 15/73 (21%)
EGF_CA 5131..5174 CDD:284955 19/45 (42%)
EGF_CA 5176..5213 CDD:214542 17/39 (44%)
EGF_CA 5214..5251 CDD:214542 14/59 (24%)
EGF_CA 5256..5297 CDD:284955 19/85 (22%)
EGF_CA 5299..5338 CDD:214542 17/56 (30%)
EGF_CA 5420..5459 CDD:214542 18/86 (21%)
EGF_CA 5460..5496 CDD:214542 16/37 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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