DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and vwa10.1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_021332508.1 Gene:vwa10.1 / 557256 ZFINID:ZDB-GENE-090313-291 Length:832 Species:Danio rerio


Alignment Length:884 Identity:179/884 - (20%)
Similarity:279/884 - (31%) Gaps:295/884 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  3909 KCIDPCL---TSCAGGVKCVVSAHRVTICTCPATLTNNTDSNCTSTDITVGTTTQRIETTT---- 3966
            |....||   ||....|..:::: ::|     |::.....||..||.:.:.|.|..|...|    
Zfish    47 KMAQVCLKTATSRGQNVTLLINS-KLT-----ASIVERACSNAYSTLLKIPTFTAVIVQATLSNA 105

  Fly  3967 ----------------DFIN-----------VKYTVMQ---LANQTEMRTRFTDIE--------A 3993
                            ||.|           ||.:|.|   ||.:|.:.|....::        .
Zfish   106 AVDRKQFSTAHHFDEEDFKNGRDLITQGMTAVKVSVKQGNYLAARTSLGTVCHTLQDFYSHSNWV 170

  Fly  3994 ENETTGPYTTTTESYKTTKQLSSNPETET--------------PTTL--------------PSRP 4030
            |..:|.||:|..:.......| :.|.|:|              |..:              |.:|
Zfish   171 ELGSTDPYSTLIKPELPLSNL-AGPNTKTCKSCVGDDCTDNILPEIIQQKLLTSGYFSLITPKKP 234

  Fly  4031 TTR----PFTDQT--TEFTSEI--PTITPMEGSTPTPSHLETTVASITSESTTREVYTIK----- 4082
            ..:    .|.|:|  ||.|..|  ..|....|      .|....|::...:|...:..|:     
Zfish   235 AGKCSHGGFFDRTSYTEPTGGINKDDIASSHG------FLHQRAANMAINATMEMLEDIRLAVGD 293

  Fly  4083 -PFDRSTPTPVSPDTTVPSITFETTTNIPIGTTRGQVTEQ-------------TTSSPSEKRTTI 4133
             .|.|....   ..|:|.:|.|::|     |:....:.|.             |:..|||   .:
Zfish   294 LAFLRLMGL---TQTSVLAIVFDST-----GSLSAYIAEAKTMLFSFIDSIIGTSEEPSE---YM 347

  Fly  4134 RVEESTLPSRSTDRTTPSES------------PETP-----------TILPSDSTTRTYSDQTTE 4175
            .|..|.|.:.|..:|:.:|:            ...|           |.:|..|....|:|...:
Zfish   348 LVLFSDLDAGSLIKTSNAETFKEQINSLSLLVNSNPGMCLSALLLALTRVPPSSDIFVYTDGPAK 412

  Fly  4176 STRDVPTTRPFEASTPSPASLETTVPSVTLETTT-----------NDPIGSTGGQVTEQTTSSPS 4229
            .::...:......||.|..:...|.|:::..:::           .|....:|||..|.|.|:.|
Zfish   413 DSQLKSSVEAMIQSTKSKVNFLLTNPTLSRASSSKALSQSDIQLYRDLAHISGGQTIEVTLSTVS 477

  Fly  4230 EVRTTIGLEESTLPSRSTDRTTPSESPETPTTLPSDFITRPHSDQTT--ESTRDVPTTRPFEAST 4292
            :..|.||                            |.||   |.|.|  :..|:...|..|    
Zfish   478 QAITLIG----------------------------DEIT---SGQVTILQVNRNASQTESF---- 507

  Fly  4293 PSSASLETTVPSVTLETTTNVPI----GSTGGQVTEQTTSSP-SEVRTTIRVEESTLPSRSADRT 4352
              |..|::|:.:|.:..|.:.|:    ..||...:....:.| ..:.|...:....|.|.:.   
Zfish   508 --SFVLDSTLSNVIVYITGDSPVFTLYSPTGVSQSSSVAAGPLGSILTVNSLMRLKLNSNNL--- 567

  Fly  4353 TPSESPETPTTL--PSDFTTR-------------------PHSEQTTESTRDVPTTRPFEASTPS 4396
                :.|...|:  |:.:|.:                   .|.:...:|     .||||   |..
Zfish   568 ----TGEWKITVNSPNSYTLKVIGQSSMNVLVYFVEIFQGGHGDSWGQS-----YTRPF---TGR 620

  Fly  4397 PASLETTVPSVTLETTTNV-PIGSTGGQVTGQTTSSPSEVRTT-IRVEESTLPSRSADRTTPSES 4459
            .|:|..:|......|.|:| .:.::|..|...|..:   |.|| ..|...|:|..:         
Zfish   621 NATLFVSVTGGDSVTVTDVLLVEASGSAVVNGTIKA---VGTTDFLVNIDTIPEWA--------- 673

  Fly  4460 PETPTTLPSDFITRPHSEKTTEST-----RDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPI 4519
                      |:.:........||     |..|........|..:.|...|.|.|.|..:..|..
Zfish   674 ----------FVVQLRGLLNKSSTISRFQRQSPIQLKGSKITVVAQSQNVTQPGVPLNISFTVAA 728

  Fly  4520 GSTGGQ--VTEQTTSSPSEVRTTIRVEESTLPSRSADRTTLSESPETPTTL--PSDFTIRPHSEQ 4580
            .:|||.  :..:|....|     :.|..|.|.:...       |.:...||  |||         
Zfish   729 NATGGNYIIRARTNQGFS-----VSVSSSLLVAAGG-------SAQGNITLITPSD--------- 772

  Fly  4581 TTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNV 4619
             |||..||..|  .||..|....|......:|..|.:.|
Zfish   773 -TESGTDVTLT--IEAEAPGSTDLNYATLRLTVSTASAV 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572 46/242 (19%)
DUF4696 4127..4678 CDD:292395 116/566 (20%)
DUF4758 4275..4448 CDD:292572 41/202 (20%)
DUF4758 4377..4574 CDD:292572 47/207 (23%)
DUF4758 4581..4754 CDD:292572 13/39 (33%)
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
vwa10.1XP_021332508.1 Het-C <153..>172 CDD:311270 1/18 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.