DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Hmcn1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_006529820.1 Gene:Hmcn1 / 545370 MGIID:2685047 Length:5658 Species:Mus musculus


Alignment Length:565 Identity:163/565 - (28%)
Similarity:233/565 - (41%) Gaps:153/565 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 GNYTCSCPDGYVGNN--PYREGCQDVDECSYPNVCGPGAICTNLEGSYRCDCPPGYD--GDGRSE 293
            |:.:..||.|::.::  |:   |.|.|||:..|.|  ...|.|..|:|.|.||.|..  .|||: 
Mouse  5109 GDRSNQCPSGFILDSVGPF---CADEDECTAGNPC--SHTCHNAIGAYYCSCPKGLTIAADGRT- 5167

  Fly   294 SGCVDQDECA--RTPCGRNADCLNTDGSFRCL--CPDGY--SGDPMNGCEDVDECATNNPCGLGA 352
              |.|.||||  ...|....||.||.||:||:  |..|:  :.|.:: |:|::||..::||  ..
Mouse  5168 --CQDIDECALGGHTCRAGQDCDNTIGSYRCVVHCGTGFRRTSDGLS-CQDINECQESSPC--HQ 5227

  Fly   353 ECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDEC 417
            .|.|:.|||.|.|.:|:.|:                                   |..|:|::||
Mouse  5228 RCFNVIGSFHCGCEAGYQLK-----------------------------------GRKCIDVNEC 5257

  Fly   418 NQPDGVAKCGTNAKCINFPGSYRC--LCPSGFQGQGYLHCENINECQD--NPCGENAICTDTVGS 478
            .|    ..|..:..|.|..|.|:|  |||||........|.:|:||:|  :.|..|.||.:|.||
Mouse  5258 RQ----NVCRPDQHCKNTRGGYKCIDLCPSGMTKAENGTCIDIDECKDGTHQCRYNQICENTRGS 5318

  Fly   479 FVCTCKPDYTGDPF-RGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGY----DGKPDPKVA 538
            :.|.|...|..... |.|:||:||..:.|||...  |.|:...:.|.|..|.    |||     :
Mouse  5319 YRCACPRGYRSQGVGRPCIDINECEQVPKPCAHQ--CSNSPGSFKCICLPGQQLLGDGK-----S 5376

  Fly   539 CEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGS 603
            |..::    ..||:.       .:...:.|:.|.|:.|........|.::::...:::..|:..|
Mouse  5377 CAGLE----RLSNYG-------TQYSSYTLERFSPVRSDYQPSQHYRQYSQLYSSYSEYRNSRAS 5430

  Fly   604 YGCECEAGYVGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDEC 668
            :          |..|...::.|            |:.:||          |...    |||||||
Mouse  5431 F----------SRNRRTIRKTC------------PEGSEA----------NHET----CVDIDEC 5459

  Fly   669 DVMHGPFGSCGQNA-----TCTNSAGGFTCACPPGFSGDPHSK-CVDVDECRTGASKCGAGAECV 727
                       ||.     .|.|:.|.:.|.||||:....:.| |.|||||.....:||....|.
Mouse  5460 -----------QNRDTCQHECKNTIGSYQCVCPPGYRLMLNGKTCQDVDECLEQNVRCGPNRMCF 5513

  Fly   728 NVPGGGYTC---RCPGNTIADPDPSVRCVPIVSCSANEDCPGNSI 769
            |: .|.|.|   .||.|...||       .:..|..|  ||.|.:
Mouse  5514 NM-RGSYQCIDTPCPPNYQRDP-------VLGFCLKN--CPPNDL 5548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011 4/13 (31%)
EGF_CA 255..>286 CDD:214542 13/30 (43%)
EGF_CA 298..331 CDD:238011 16/38 (42%)
EGF_CA 338..373 CDD:238011 14/34 (41%)
EGF_CA 413..456 CDD:238011 15/44 (34%)
EGF_CA 457..490 CDD:238011 14/34 (41%)
EGF_CA 497..>529 CDD:214542 11/31 (35%)
EGF_CA 580..>612 CDD:214542 3/31 (10%)
EGF_3 676..702 CDD:289699 10/30 (33%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Hmcn1XP_006529820.1 vWFA 42..198 CDD:238119
Ig 520..608 CDD:386229
Ig 612..696 CDD:386229
I-set 702..789 CDD:369462
I-set 793..884 CDD:369462
Ig 890..977 CDD:386229
Ig 980..1071 CDD:386229
I-set 1085..1167 CDD:369462
I-set 1171..1257 CDD:369462
Ig 1266..1354 CDD:386229
I-set 1368..1447 CDD:369462
IG_like 1459..1541 CDD:214653
Ig 1564..1632 CDD:386229
I-set 1644..1728 CDD:369462
I-set 1751..1821 CDD:369462
Ig 1843..1935 CDD:319273
Ig 1949..2031 CDD:386229
Ig 2044..2115 CDD:386229
I-set 2134..2214 CDD:369462
I-set 2226..2309 CDD:369462
Ig_3 2313..2390 CDD:372822
Ig 2429..2491 CDD:319273
I-set 2501..2590 CDD:369462
I-set 2605..2686 CDD:369462
I-set 2704..2785 CDD:369462
Ig 2818..2881 CDD:319273
I-set 2902..2983 CDD:369462
I-set 3005..3075 CDD:369462
I-set 3087..3170 CDD:369462
Ig 3192..3260 CDD:319273
Ig 3267..3361 CDD:386229
I-set 3377..3453 CDD:369462
I-set 3468..3546 CDD:369462
IG_like 3558..3639 CDD:214653
I-set 3652..3732 CDD:369462
I-set 3736..3823 CDD:369462
Ig 3846..3912 CDD:319273
Ig 3937..4004 CDD:319273
Ig 4028..4090 CDD:319273
I-set 4102..4188 CDD:369462
Ig 4209..4276 CDD:319273
I-set 4283..4368 CDD:369462
Ig 4387..4458 CDD:386229
I-set 4463..4549 CDD:369462
TSP1 4556..4607 CDD:214559
TSP1 4612..4664 CDD:214559
TSP1 4669..4721 CDD:214559
TSP1 4726..4778 CDD:214559
TSP1 4783..4835 CDD:214559
TSP1 4840..4892 CDD:214559
G2F 4891..5115 CDD:214774 1/5 (20%)
EGF_CA 5130..5169 CDD:214542 17/43 (40%)
EGF_CA 5170..5213 CDD:311536 17/43 (40%)
EGF_CA 5215..5252 CDD:214542 15/73 (21%)
EGF_CA 5253..5286 CDD:238011 15/36 (42%)
EGF_CA 5295..5336 CDD:311536 15/40 (38%)
EGF_CA 5338..5377 CDD:214542 15/45 (33%)
EGF_CA 5455..5494 CDD:214542 16/49 (33%)
EGF_CA 5495..5531 CDD:214542 15/36 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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