DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Umodl1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_803416.2 Gene:Umodl1 / 52020 MGIID:1929785 Length:1348 Species:Mus musculus


Alignment Length:1026 Identity:220/1026 - (21%)
Similarity:312/1026 - (30%) Gaps:327/1026 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  7602 SLETTVPSVTLETTTNVPIGSTGGQVTGQTTATPSEVRTTIGVEESTLPSRSTDRTTPSESPETP 7666
            ||:.....|||..|...|..|.|..     |.||            .||..|.......:...  
Mouse   450 SLQAGSLVVTLRLTLQDPDFSVGVH-----TLTP------------MLPVLSVSNVFQVDQQR-- 495

  Fly  7667 TTLPSDFTTRPHSDQTTESTRDV-PTTR--PFEAS-TPRPVTLETAVPSVTS---ETTTNVPIGS 7724
             |...|:....||     |..|. |:.|  ..|.| |.:.:|...|.||...   |....:|.|.
Mouse   496 -TFVQDWDECAHS-----SEHDCHPSARCINLEGSYTCQCLTARDASPSRAGRVCEGDMVIPTGD 554

  Fly  7725 TVTSETTTNVPIGSTGGQVAGQTTAPPSEVRTTIRVEESTLPSRSADRTTPSES----PETPTTL 7785
            .::..|...||..||     |.||..|..:..::        |....|:||:.|    |..|:..
Mouse   555 ELSVTTKVTVPAAST-----GITTFGPETLTESL--------SSKHPRSTPARSQTWTPVPPSVR 606

  Fly  7786 PSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVP--IGSTGGQLTEQ 7848
            ......| ....:|....:||...|         :|..|..| ||..|::||  .|.|.|  |.|
Mouse   607 DGGSIVR-QDRNSTGQGMEVPNVTP---------NLGKTHRS-TSGVTSSVPWAPGQTHG--THQ 658

  Fly  7849 STSSPSEVRTTIRVEESTLPSRSTDRTFPSESPEKPTTLPSDFTTRPHLEQTT------------ 7901
            .|:. :.:.||                  .||.|..|..|      |.|..||            
Mouse   659 GTTD-APLHTT------------------RESQELITKDP------PFLTATTTGYVVWHSSPTW 698

  Fly  7902 ----ESTRDVLTTRPFETSTPSPVSLETTVPSVTSETSTNVPIGSTGGQVTEQTTA-------PP 7955
                .||| :....|..:|.|.|.|..|   .||.|:...|| |..|.......|:       |.
Mouse   699 KTPPNSTR-LQNEDPRSSSFPGPPSAPT---DVTPESPACVP-GPIGKVTVSNVTSTSFSLEWPA 758

  Fly  7956 SVRTTE----TIVKSTHPAVSPDTTIPSEIPATRVPLESTTRLYTDQTIPPGSTDRTTSSERPDE 8016
            .:|.:.    |:|....||::.:|   .....|...||..| ||..:.:                
Mouse   759 DIRLSPAFHLTLVSPRGPAMTMET---QNNNVTLSGLEWGT-LYLVEIV---------------- 803

  Fly  8017 STRLTSEESTETTRPVPTVSPRDALETTVTSL-ITETTKTTSGGTPRG--QVTERTTKSVSELTT 8078
             .::..:|...|...|.||:.:.|....:||: .:|:...||....|.  ::..||.:.....|.
Mouse   804 -AKVCGKEGARTQLKVRTVAQKLAGNVRITSMQYSESFLNTSSREHREFVELFFRTVRDSLPATL 867

  Fly  8079 GRSSDVVTERTMPSNISSTTTVFNNSEPVSDNLPTTISITVTD----------SPTTVPVPTCKT 8133
            .:..|....|....||:      |.|..|..||..|..:.|.:          :.:.:.|...||
Mouse   868 RQHMDAGRIRVDIINIT------NGSIVVEFNLLMTADLDVREVSAGFLNALQNTSMLEVVRGKT 926

  Fly  8134 ---DY-DC-LDEQTCIGGQCISPCEYFTNLCTVQNLTICRTLNHTTKCYCDTDDDVNRPDCSMKA 8193
               || :| :.|..|..|.|.:....||                   |.||.    ..||..::.
Mouse   927 FMQDYNECDMKEDDCAPGTCRNTFGSFT-------------------CSCDE----GGPDSQVEY 968

  Fly  8194 EIGCASSDECPSQQACINALCVDPCTFNNPCSRNEDCRVFNHQPLCSAEHGRTPGCEHCPPGAN- 8257
                       |.::|..    ||                      |....:|||.|..|..|. 
Mouse   969 -----------SGRSCDG----DP----------------------SGNMTQTPGSEWSPTPAGT 996

  Fly  8258 ---------------------CDPTTGACIKANVTITTITTKNSTSTKIPTKPRTTANPNTGVKT 8301
                                 .|..:.:| :....|.||..:......||........|:..|..
Mouse   997 RGVPVPIASSTAQDLPLRLNLMDAVSVSC-EIETVIITIQKRFLQQAAIPEASLYLGEPSCNVSR 1060

  Fly  8302 TPTT------------TRVTTRNTTTTTTTTTTSSTSTES--------STITSATNQ---TSKNQ 8343
            :.:|            |.:.:..|||..|||..::.|.|.        |.|..|...   ||...
Mouse  1061 SNSTHVFLVAGWGECGTILQSNMTTTVVTTTLRNNLSPEGVIHHPQFLSPIHCAFQNDVLTSSGY 1125

  Fly  8344 KP---------DTESTTSHTDATRRYRDGENNITDTPTPRPTIQTTTLRGEGVMGDSQRRSTTTP 8399
            .|         |...|.:.....:.|      |.|:|.|:....:.:...:..:|..:::|:   
Mouse  1126 TPQWGVYTVIEDLHGTGNFVTEMQLY------IGDSPIPQNYSVSASDEIKIEVGLHRQKSS--- 1181

  Fly  8400 KMKTTRLDTSNEVPDTTSPWPIELPTTEGTTTEVYNTMFAPVVNTTDT----------------- 8447
             :|..          .|..|.......:...|..:.....||.||..:                 
Mouse  1182 -LKVV----------LTECWATPSSNAKDPVTFSFINNSCPVPNTYTSVIQNGHSSKAQFKLRIF 1235

  Fly  8448 SLINPCTVDTNCAPNEHCKLGHCRKKEPPGSPKTPEPCQSNNDCIESEACY 8498
            |.||      |.....||||..| .:.|..|.:.  .|........|||.:
Mouse  1236 SFIN------NSIVYLHCKLRVC-MENPRNSCRI--SCNDFRSLRSSEALH 1277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395 99/401 (25%)
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572 27/108 (25%)
DUF4758 7798..7979 CDD:292572 53/209 (25%)
DUF4758 7946..8126 CDD:292572 40/203 (20%)
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Umodl1NP_803416.2 WAP 120..158 CDD:278522
SEA 391..>467 CDD:279699 6/16 (38%)
EGF_CA 502..>529 CDD:214542 9/31 (29%)
fn3 737..814 CDD:278470 17/97 (18%)
SEA 829..>895 CDD:295333 17/71 (24%)
EGF_CA 930..973 CDD:238011 15/76 (20%)
ZP 1025..1265 CDD:214579 52/269 (19%)
Zona_pellucida <1158..1265 CDD:278526 22/129 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.