DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Scube2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_003749018.1 Gene:Scube2 / 499241 RGDID:1563998 Length:972 Species:Rattus norvegicus


Alignment Length:1001 Identity:241/1001 - (24%)
Similarity:315/1001 - (31%) Gaps:392/1001 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GGCNCVDKDENECKQ--RPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVE 183
            |..|...:|.:||.|  ..|...|.|.||..|:.|:|.|||:|.|..|||:||| |.|:...||.
  Rat    39 GRTNGPPEDVDECAQGLDDCHADALCQNTPTSYKCSCKPGYQGEGRQCEDMDEC-DNALNGGCVH 102

  Fly   184 NAECCNLPAHFLCKCKDGY--EGDGEVLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDG-YVG 245
              :|.|:|.::.|.|.||:  ..||. .|.|||||.. .|.|....|||..|:|.|.|.:| ::.
  Rat   103 --DCLNIPGNYRCTCFDGFMLAHDGH-NCLDVDECLE-NNGGCQHTCTNVMGSYECRCKEGFFLS 163

  Fly   246 NNPY------REG--CQDVDE-CSYPNVCGPGAICTNL-EGSYRCDCPPGYD------------- 287
            :|.:      .||  |.:.|. |::        ||... .||..|:|.||::             
  Rat   164 DNQHTCIHRSEEGLSCMNKDHGCAH--------ICKEAPRGSIACECRPGFELAKNQRDCILTCN 220

  Fly   288 -GDGRSESGCVDQDECARTPCGRNADC-----LNTDGSFRCLCPDG--YSGDPMNGCEDVD---- 340
             |:|    ||  |..|..|..|....|     |:.||. .||..:|  ..|...|.....|    
  Rat   221 HGNG----GC--QHSCEDTAEGPECSCHPHYRLHADGR-SCLEQEGTMLEGTESNATSVADGDKR 278

  Fly   341 --------ECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATD 397
                    .||.||. |....|.:......|.|||||.|:.|                       
  Rat   279 VKRRLLMETCAVNNG-GCDRTCKDTSTGVHCSCPSGFTLQLD----------------------- 319

  Fly   398 IAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYL----HCENI 458
                      |..|.|||||...:|    |.|..|.|..||:.|.|..||:   .|    .|:::
  Rat   320 ----------GKTCKDIDECQTRNG----GCNHFCKNTVGSFDCSCRKGFK---LLTDEKSCQDV 367

  Fly   459 NECQ-DNPCGENAICTDTVGSFVCTCKPDYTGDPFRGCVDIDECTALDKPCGQHAVCENTVPGYN 522
            :||. :..|..:  |.:..|:|.|.|...||...|..|.|.:||:..:..|.|  ||.|||.||.
  Rat   368 DECSLERTCDHS--CINHPGTFTCACNRGYTLYSFTHCGDTNECSVNNGGCQQ--VCVNTVGGYE 428

  Fly   523 CKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSS------CVDI 581
            |:|..||      |:.                .|..:|:|     :.|..|..::      |...
  Rat   429 CQCHPGY------KLH----------------WNKKDCVE-----VKGVLPTSTTPRVSLHCGKS 466

  Fly   582 ---DEC--RTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVRCG---------- 631
               |.|  |.|:   |.|... ....:|...|     |||...:.:|...|...|          
  Rat   467 GGGDRCFLRCHS---GIHLSS-GLQEAYSVTC-----GSPSLRSRQQKSNDSAFGDVVTVRTSVT 522

  Fly   632 --------------------------AHAYCKPDQNEAYCVCEDG-------------------- 650
                                      .|:..|...:.|...|..|                    
  Rat   523 FKLNEGKCSLQKAKLSPEGLRPALPERHSSVKESFHYANLTCSPGKQVLGALGRPNAPKEMFITV 587

  Fly   651 ----WTYNPSDVAAGC-----------------------------------VDIDECDVMHGPFG 676
                .||. .:|.|.|                                   .|:|.....  |..
  Rat   588 EFERETYQ-KEVTASCNLSCVVKRTEKRLRKAVRTLKKAAHREQFHLQLSGTDLDVAKKF--PRV 649

  Fly   677 SCGQNATCTNSAG--GFTCA-CPPG-FSGDPHSKCVDVDECRTGASKCGAG-AECVNVPGGGYTC 736
            |..|..||....|  ...|. |.|| :|.|..:.|   ..|..|..:...| ..|:...||..|.
  Rat   650 SGQQEETCGVGQGREESQCGLCQPGEYSADGFAPC---QPCALGTFQPDVGRTSCLPCGGGLPTK 711

  Fly   737 RCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCL-CP----EPNIGNDCRHPCEALNC 796
            .....:..|      |...|.||     ||:.....|.||: ||    :|..|.:          
  Rat   712 HLGATSFHD------CETRVQCS-----PGHFYNTTTHRCIRCPLGTYQPEFGKN---------- 755

  Fly   797 GAHAQCMLANGQAQCLCAPGYTGNSALAGGCNDIDECRANPCAEKAICSNTAGGYLCQCPGGSSG 861
                         .|:..||.|...  ..|..:|.:|:...|                  ||..|
  Rat   756 -------------NCVSCPGNTTTD--FDGSTNITQCKNRKC------------------GGELG 787

  Fly   862 D-----------------------------------------PYREGC----ITSKTVGCSDANP 881
            |                                         |..:.|    :..||   |.:|.
  Rat   788 DFTGYIESPNYPGNYPANSECTWTINPPPKRRILIVVPEIFLPIEDDCGDYLVMRKT---SSSNS 849

  Fly   882 CATGETCVQDSYTGNSVCICRQGYER 907
            ..|.|||              |.|||
  Rat   850 VTTYETC--------------QTYER 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 13/28 (46%)
EGF_CA 212..247 CDD:238011 15/35 (43%)
EGF_CA 255..>286 CDD:214542 9/32 (28%)
EGF_CA 298..331 CDD:238011 11/39 (28%)
EGF_CA 338..373 CDD:238011 14/46 (30%)
EGF_CA 413..456 CDD:238011 17/46 (37%)
EGF_CA 457..490 CDD:238011 10/33 (30%)
EGF_CA 497..>529 CDD:214542 14/31 (45%)
EGF_CA 580..>612 CDD:214542 8/36 (22%)
EGF_3 676..702 CDD:289699 10/29 (34%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Scube2XP_003749018.1 EGF_3 51..86 CDD:289699 15/34 (44%)
FXa_inhibition 97..128 CDD:291342 11/33 (33%)
FXa_inhibition 134..169 CDD:291342 12/35 (34%)
FXa_inhibition 179..215 CDD:291342 11/43 (26%)
FXa_inhibition 219..254 CDD:291342 12/41 (29%)
FXa_inhibition 288..323 CDD:291342 15/68 (22%)
vWFA <314..363 CDD:294047 22/88 (25%)
vWFA <361..397 CDD:294047 10/37 (27%)
FXa_inhibition 409..444 CDD:291342 16/58 (28%)
GCC2_GCC3 674..721 CDD:285001 12/55 (22%)
GCC2_GCC3 730..777 CDD:285001 14/71 (20%)
CUB 782..893 CDD:238001 19/115 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.