DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and egf

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001352456.1 Gene:egf / 403045 ZFINID:ZDB-GENE-070922-1 Length:1177 Species:Danio rerio


Alignment Length:1300 Identity:282/1300 - (21%)
Similarity:401/1300 - (30%) Gaps:481/1300 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QQPQPFKTNLRANSRFRGEVFYLNLENGYFGCQVNESTEYLQLFNLSKLCDGTQDCFLGADELSK 89
            ||.|...|.: .:..:.|.:  :|:.|..|..|....|.:|....||             |..||
Zfish   224 QQGQRGHTAM-GSCNYDGNI--INVFNQQFRPQSLRMTIFLDYVYLS-------------DSKSK 272

  Fly    90 ELKCTNDCDKDGTKCTHGACLNGVCHCNDGYGGCNCVDKDENECKQR----PCDV-FAHCTN--- 146
            .:...|       |.|.|                    :.||...||    |.|| ..|..|   
Zfish   273 TITRLN-------KYTGG--------------------RQENVSSQRMPHSPADVKVVHPINQPV 310

  Fly   147 TLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVENAECCNLPAHFLCKCKDGY----EGDGE 207
            ....||..|   .|..|                .||:  .|.:.....||.||||:    .|:  
Zfish   311 VETPFTPGC---SRHTG----------------ECVK--VCSSHTDTGLCGCKDGFTLSKHGN-- 352

  Fly   208 VLCTDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGCQDVDECSYPNV-CGPGAIC 271
             :|.||:|| :..|.|.:..|.|.||:|.|:||:||: ..|..:.||:...|....| |...  |
Zfish   353 -ICEDVNEC-SLWNHGCSLGCENVPGSYFCTCPEGYL-LLPDLKTCQENKPCVGKAVDCDHA--C 412

  Fly   272 TNLEGSYRCDCPPG--YDGDGRSESGCVDQDECARTPCGRNADCLNT-DGSFRCLCPDGYSGDPM 333
            .:......|.||.|  .:.||:|.:||...|   |..|.:.  |:.. .|.:.|.|..||...| 
Zfish   413 VHTAQGDMCVCPEGSLLNPDGQSCTGCFSAD---RGGCSQM--CVTLYPGRWVCECHPGYQIQP- 471

  Fly   334 NGCEDVDECATNNPCG-------LGAECVNLGGSFQCRC---PSGFV--LEHDP------HADQL 380
                |...||...|..       :....:|..|....:.   |.|.:  :::||      .||:.
Zfish   472 ----DGKHCAATGPPADLLFANIVDLRKINTDGKLSIKLLEKPGGNITAVDYDPVTNKVYFADKG 532

  Fly   381 PQPLNTQQLGYG------------PGATDIAPYQRT---SGAGLACLDIDECNQPDGVAKCGTNA 430
            .:.:....|..|            |.|..:...||.   :.:||:.:.....|            
Zfish   533 LKHIERASLDEGFRELLVSTGLNSPEALAVDWIQRKLYWTDSGLSSISRSSLN------------ 585

  Fly   431 KCINFPGSYRCLCPSGFQGQGYLHCENINECQD---NPCGENAICTDTVGSFVCTCKPDYTGDPF 492
                           |...:.::: |||.:.:.   :|..:....||             .||  
Zfish   586 ---------------GLDREIFIN-ENIQKPRGIALHPQAQKIYWTD-------------MGD-- 619

  Fly   493 RGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQG--YDGKPDPKVACEQVDVNILCSSNFDCT 555
            |..|   |.:.|||...:..|....|      .|.|  .|........|: :..:::.|:|.|.:
Zfish   620 RPAV---ERSGLDKDLREAVVSTGLV------SPSGLAVDHGSQRLYWCD-MSTSVIESANLDGS 674

  Fly   556 NNAECIENQC---FCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPP 617
            :.....:||.   |.:..||.:    :.:.:...|.              .:..:..:|.  :|.
Zfish   675 HRRVISQNQVDRPFDIAVFENV----LWVSDLENHL--------------IFRLDMRSGQ--NPE 719

  Fly   618 RMACK--QPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQ 680
            |:...  ||...|  ..|...||..:    ||.||                        .|.|.|
Zfish   720 RLLVDSIQPAALV--VVHPLAKPGAD----VCLDG------------------------NGGCAQ 754

  Fly   681 NATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCRCPGNTIAD 745
              .|.:..|...|:|...     |....|...||...:.....:|      ||........|:.|
Zfish   755 --VCVSRLGLPHCSCHTN-----HVLSADGKGCRMINASFSESSE------GGSNDGLRNKTLND 806

  Fly   746 PDPSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQ 810
            ....:..:......:::|                          .|.:|:|..:|||.|..|:|.
Zfish   807 ESTPLAMLYTEKMVSDQD--------------------------DCFSLSCVVNAQCFLQEGRAV 845

  Fly   811 CLCAPGYTGNSALAGGCNDIDECRAN--PCA-EKAICSNTAGGYLCQCPGGSSGDPYREGCITSK 872
            |.|..|:||:..|   |.|:|||:|.  .|: .:|.|.||||||.|||..|.|||          
Zfish   846 CQCVRGFTGDGEL---CVDVDECKAGLADCSVSEAECVNTAGGYFCQCKNGFSGD---------- 897

  Fly   873 TVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNALCKN 937
                        |..||                          |:|||.:....  |.:||.|.|
Zfish   898 ------------GHHCV--------------------------DIDECRLDLHD--CDVNAECLN 922

  Fly   938 LPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCS-----------SG-QAC 990
            ..|.|:|||..|..|..|           .||:.:.  |.|...|..|           :| |:|
Zfish   923 AVGEYQCRCRSGFTGTGF-----------SCQAEFN--GTSLWPSTASPPDVTSTLQHKNGVQSC 974

  Fly   991 PSGAECISIAGGVSYCACPKGYQTQPDGSCVDVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGY 1055
            ||..:        |||..        ||.|....:.|                  ||:|:|..||
Zfish   975 PSTHD--------SYCLY--------DGVCFYFPDME------------------SYACNCVLGY 1005

  Fly  1056 QGDAYNGLCALA-------QRKCAADRECAANEKCI-------QPGECVCPPPYFLDPQDNNKCK 1106
            .|:.    |..:       |:.....|.......||       ....|:            ..|.
Zfish  1006 MGER----CQFSDLEWWELQQAEEGKRRNMVIAVCIVLLITILSIAACI------------TFCY 1054

  Fly  1107 SPCERF-PCGI----------------NAKCTPS-----DPPQCMCEAGFKGDPLLGCTDEDECS 1149
            .|...| .|.:                ....||.     |...|..               |:..
Zfish  1055 RPKRHFGGCSLQDSVGEMSASEDSFTETTTATPEVYVVLDTSTCTA---------------DKVL 1104

  Fly  1150 HLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKSGCIFESGTPKSKCLSNDDCASNLACLEGSCVSP 1214
            |:.......|.:        ||.. |||.:.|.   |:|.     |..|.|:..:|....||..|
Zfish  1105 HVQSTTSTICSS--------CPTQ-TGDRFSSE---EAGK-----LQRDGCSLAVAICSVSCDIP 1152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 10/32 (31%)
EGF_CA 212..247 CDD:238011 16/34 (47%)
EGF_CA 255..>286 CDD:214542 8/33 (24%)
EGF_CA 298..331 CDD:238011 9/33 (27%)
EGF_CA 338..373 CDD:238011 8/46 (17%)
EGF_CA 413..456 CDD:238011 2/42 (5%)
EGF_CA 457..490 CDD:238011 5/35 (14%)
EGF_CA 497..>529 CDD:214542 8/33 (24%)
EGF_CA 580..>612 CDD:214542 1/31 (3%)
EGF_3 676..702 CDD:289699 7/25 (28%)
EGF_CA 1022..1056 CDD:214542 6/33 (18%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
egfNP_001352456.1 NHL 34..>197 CDD:302697
NHL repeat 81..121 CDD:271320
NHL repeat 123..160 CDD:271320
LY 156..197 CDD:214531
vWFA <351..394 CDD:320736 19/47 (40%)
FXa_inhibition 441..476 CDD:317114 11/44 (25%)
LY 506..546 CDD:214531 8/39 (21%)
LY 549..589 CDD:214531 8/66 (12%)
LY 590..629 CDD:214531 11/57 (19%)
LY 634..676 CDD:214531 9/48 (19%)
FXa_inhibition 745..780 CDD:317114 12/65 (18%)
EGF_3 865..901 CDD:315598 19/57 (33%)
EGF_3 907..942 CDD:315598 14/47 (30%)
PHA02887 <959..1058 CDD:333467 27/148 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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