DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Umodl1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_038955155.1 Gene:Umodl1 / 365544 RGDID:1566039 Length:1295 Species:Rattus norvegicus


Alignment Length:1324 Identity:268/1324 - (20%)
Similarity:413/1324 - (31%) Gaps:427/1324 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  3789 CIVPLGRAAICAENKSCEVQNHKPVCICMRDCQPSISICLRDAGCPASQACRKLKCVDP--CEFA 3851
            |.|.||:.:...||....:               |..:|    ..|.:::.:||:.|..  ..:.
  Rat    14 CTVDLGQTSGFTENGLSLL---------------SYQLC----SYPMTRSVQKLQAVQTSYTAYV 59

  Fly  3852 TCA---PNSPC--------IVEDHKPICK---FCPAGF----------------IADAKNGCQKA 3886
            .|.   |...|        .:|.:.|..:   .|.|||                .|.....|..|
  Rat    60 YCGGWIPWKKCPKTVYRTQYLEMNVPESRNVTDCCAGFEQLGLYCVLSRNRSREFASRPGVCPTA 124

  Fly  3887 KPG---GNCTSNTDCSQAHQC---GSSGKCIDPCLTSCAGGVKCVVSAHRVTICT---------- 3935
            :||   .:|:.:|||....:|   ....:|:.|..|   |..:.:|..:.||:..          
  Rat   125 EPGPFTSSCSLDTDCPGLQKCCAWPGGHRCVSPTPT---GTERSIVGWYNVTVLVKMGFEDLQRE 186

  Fly  3936 ----------------------CPA----TLTNNTDSNCTSTDITVG----TTTQRIET-TTDFI 3969
                                  .||    |.|...|:..|.:.:.:|    .|...:.| ..|.:
  Rat   187 DPGLRNHTRLLYSLVTSALQPLNPAVHYLTSTGGKDTFTTVSWLLLGFPQRMTVANVSTMLDDMV 251

  Fly  3970 NVKYTVMQLANQTEMRTRFTDIEAENETTGPYTTTTE-SYK--TTKQLSSNPETETPTTLPSRPT 4031
            |..|.|:.:..|.......::::|.:|  |......| ||:  :.:||         |||||:..
  Rat   252 NRVYEVISIQVQDVNECLHSELQACSE--GKQCWNLEGSYQCVSPQQL---------TTLPSQHL 305

  Fly  4032 TRPFTDQTTEFTSEIPTITPMEGSTPTPS--HLETTVASITSESTTREVYTIKPFDRSTPTPVSP 4094
            ..  ||:      :.|.|........|.|  |:..::.|..:.:...:||..:...|||.|   .
  Rat   306 NH--TDK------DCPPIRDFVALDVTSSSFHVSWSLNSTQNHTFHVQVYKGREILRSTWT---G 359

  Fly  4095 DTT--VPSITFETTTNIPIGTTRGQVTEQTTSSPSEKRTTIRVEESTLPSRSTDRTTPSESPETP 4157
            |.|  ||.:.......:   .|..|......|:....:|..||.:.|:  |..:|..      |.
  Rat   360 DRTLAVPDLEAGVLYRV---RTSYQGCRANISATLVVKTDARVFQVTI--RIMNRNL------TE 413

  Fly  4158 TILPSDSTTRTYSDQTTESTRDVPTTRPFEAST--------PSPASLETTVPSVTLETTTNDP-- 4212
            .||  :.::|.:.:.:.:..::|..:.|...|.        ....||:.....|||..|..||  
  Rat   414 QIL--NCSSREFWNFSRQLFQEVENSFPQVISNMYRQGRLKMQIVSLKAGSLVVTLRLTLQDPDF 476

  Fly  4213 ---IG-----------STGGQVTEQTT----------SSPSEVRTT---IGLEES-TLPSRSTDR 4249
               :|           ||..||.:|.|          ||..:....   |.||.| |....:...
  Rat   477 LVNVGTLKPMLQPLSMSTVFQVDQQGTRVQDWDECAHSSEHDCHPAARCINLEGSYTCQCLTARD 541

  Fly  4250 TTPSESPETPTTLPSDFITRPHSDQTTESTRDVPTTRPFEASTPSSASLETT---VPSVTLETTT 4311
            ..||.:..   ....|.:|                      .|....|:|||   ..:|::..||
  Rat   542 ANPSRAGR---VCEGDMVT----------------------PTGGGLSVETTKVKAAAVSMGITT 581

  Fly  4312 NVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTL--PSR-------SADRTTPSESPETPTTLPSD 4367
            ..|...|....:|...|:|:|      .:.|||  |||       ..||.:..:..|.|....:.
  Rat   582 FGPETLTLSPSSEHLRSTPAE------GQASTLGPPSRRDGGSTARQDRNSTGQDVEVPNVTQNP 640

  Fly  4368 FTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGGQVTGQTTSS- 4431
            .|||...|..|:..       ||  .|..........||.|.||    |:.||..|......|| 
  Rat   641 HTTRESQEHMTKGP-------PF--LTARSTGYVVWHPSPTWET----PLKSTRPQNEDPPPSSF 692

  Fly  4432 PSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDVPTTRPFEAST 4496
            |....|.:.|                 :||||..:|.     |..:.|..:......:..:.|..
  Rat   693 PGPPSTLVAV-----------------TPETPACVPG-----PIGKVTISNVTSTSFSLKWSADL 735

  Fly  4497 PSSASLETTV-----PSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVE-ESTLPSRSADR 4555
            ..|.:...|:     |:.|:||..|            ..|.|..|:.|...|| .:.:..:...|
  Rat   736 HLSPAFCLTLVSPRGPAKTMETQHN------------NVTLSGLELGTLYLVEIMAKVCGKEGAR 788

  Fly  4556 TTLSESPETPTTLPSDFT--IRPHSEQTTESTRDVP-------------TTRPFEASTPSPASLE 4605
            |.|.     ..|.....|  :|..|.|.:||.|:..             |.|.         ||.
  Rat   789 TQLK-----VRTTAHKLTGKVRIPSMQYSESFRNASSREHQEFVQMFFRTVRD---------SLP 839

  Fly  4606 TTVPSVTSETTTNVP-IGSTGGQVTGQTTAPPSEFRTTIRVEESTLPSRSTD------------- 4656
            .|:.....|....|. |..|.|.|.               ||.:.|.:...|             
  Rat   840 ATLRQHMDEGRIQVDIINITNGSVV---------------VEFNLLMTADLDVREVSAGFLSAFQ 889

  Fly  4657 RTTPSESPETPTILPSDSTTRTYSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNV 4721
            .|:..|.....||:...:......|.....|    .|..|.:.|   .|.:...|:..:|.:   
  Rat   890 NTSMLEVVRGKTIIQDYNECDMREDDCAPGT----CTNTFGSFT---CSCDGERPNSQVEYS--- 944

  Fly  4722 PIGSTGGQVTEQTTSSPSE----------VRTTIRVEESTLPSRSADRTTPSES-PETPTTL--P 4773
                  |:..:..:|:|.:          ||.:..:|...:..:.  |....|: ||....|  |
  Rat   945 ------GRSCDDASSTPQDLPLRLNLTDAVRVSCEIEMVVIAIQK--RFLQQEAIPEASLYLGEP 1001

  Fly  4774 SDFITRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLET------------------- 4819
            |..::|      :.||.....|...:..|...:::.|||...||..                   
  Rat  1002 SCNVSR------SNSTHVFLVTGWGQCGTLVQSNMTTTVVKTTLRNDLSPEGVIHHLQILSPIHC 1060

  Fly  4820 -------------------TTNVPIGSTGGQVTEQ-------------TTSSPSEVRTTIRV--E 4850
                               |....:..||..|||.             :.|:..|::..:.:  :
  Rat  1061 AFQNDLLTSSGYTPQWGVYTVIEDLHGTGNFVTEMQLFIGDSPIPQNYSVSASDEIKIEVELHRQ 1125

  Fly  4851 ESTLPSRSAD-RTTPSESPETPTT 4873
            :|.|.....: ..|||.:.:.|.|
  Rat  1126 KSNLKVVLTECWATPSSNAKDPVT 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572 48/233 (21%)
DUF4696 4127..4678 CDD:292395 136/636 (21%)
DUF4758 4275..4448 CDD:292572 46/185 (25%)
DUF4758 4377..4574 CDD:292572 44/205 (21%)
DUF4758 4581..4754 CDD:292572 36/209 (17%)
DUF4758 4683..4847 CDD:292572 38/227 (17%)
DUF4758 4785..4964 CDD:292572 24/143 (17%)
DUF4696 4841..5385 CDD:292395 8/36 (22%)
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Umodl1XP_038955155.1 WAP 117..157 CDD:395047 10/39 (26%)
EGF_CA 264..>292 CDD:214542 6/29 (21%)
FN3 313..377 CDD:214495 16/69 (23%)
EGF_CA 509..>536 CDD:214542 7/26 (27%)
FN3 711..796 CDD:238020 20/106 (19%)
SEA 804..>870 CDD:413344 19/89 (21%)
EGF_CA 905..948 CDD:238011 9/58 (16%)
Zona_pellucida 972..1212 CDD:395051 33/186 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.