DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Srcap

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017445721.1 Gene:Srcap / 361652 RGDID:1565642 Length:3266 Species:Rattus norvegicus


Alignment Length:3040 Identity:631/3040 - (20%)
Similarity:922/3040 - (30%) Gaps:958/3040 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  3948 CTSTDITVGTTTQRIETTTDFINVKYTVMQLANQTEMRTRFTDIEAENETTGPYTTTTESYKTTK 4012
            |...|....|||:....|..|::|...:|||                                 :
  Rat   875 CLYDDFMAQTTTKETLATGHFMSVINILMQL---------------------------------R 906

  Fly  4013 QLSSNPETETPTTLPSRPTTRPFTDQTTEFTSEIPTITPMEGSTPTPSHLETTVASITSESTTRE 4077
            ::.::|....|     ||.|.||             |||         .:..:.||:...:|  |
  Rat   907 KVCNHPNLFDP-----RPVTSPF-------------ITP---------GICFSTASLVLRAT--E 942

  Fly  4078 VYTIKPFD---------RSTPTPVSPDTTVPSITFETTTNIPIGT----------TRGQVTEQTT 4123
            |:.::..|         ....:....||.:|.........:.|.|          .:.:|.....
  Rat   943 VHPLQQIDMGRFDLIGLEGRVSRYEADTFLPRHRLSRRILLEIATAPDPPPRPKPVKMKVNRMLQ 1007

  Fly  4124 SSPSEKRTTIRVEESTLPSRSTDRTTPSESPE---------TPTILPSDSTTRTYSDQTTESTRD 4179
            ..|.::..|:.|..|...........|...||         .|.:||    |......:...|..
  Rat  1008 PVPKQEGRTVVVVNSPRAPLGPVPVRPPPGPEVSTQPTLGPVPPVLP----TPLMVSASPAGTPV 1068

  Fly  4180 VPTTRPFEASTPSPASLETTVPSV-TLETTTNDPIGSTGGQVTEQTTSSPSEVRTTIGLEES-TL 4242
            ||.:||     |.|..|....|:. .|......|:|...|      ||.|.  ..|:.|:.: ..
  Rat  1069 VPASRP-----PGPVLLSPLQPNTGPLPQVLPSPMGVMSG------TSRPP--TPTLSLKPAPPA 1120

  Fly  4243 PSRSTDRTTP-SESPETPTTLPSDFITRPHSDQTTESTRDVPTTR--PFEASTPS----SASLET 4300
            |.|.:....| |.|...|.|:|..:...|.:..||.||....||.  |...|||.    |..::.
  Rat  1121 PVRLSPAPPPGSSSLLKPLTVPPGYTLSPVAATTTSSTIATVTTTAVPAPNSTPQRLILSPEMQA 1185

  Fly  4301 TVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLP 4365
            .:||..:     |.||..........||:......|.:::.:.|....|.               
  Rat  1186 RLPSGEV-----VSIGQLASLAQRPVTSAGGSKPLTFQIQGNKLTLTGAQ--------------- 1230

  Fly  4366 SDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTGGQVTGQTTS 4430
                                 .|......|.|  |:..|          |.:.|.|||  ....|
  Rat  1231 ---------------------VRQLAVGQPRP--LQRNV----------VHLVSAGGQ--HHLIS 1260

  Fly  4431 SPSEVRTTIRVEE-------STLPSRSADRTTPSESPETPTTL---------PSDFITRPHSEK- 4478
            .|:.|.....|..       |.|||      |||.:| .||.|         |...:......| 
  Rat  1261 QPAHVALIQAVAPTPGPTPVSVLPS------TPSTTP-APTGLSLPLAANQVPPSMVNNTGVVKI 1318

  Fly  4479 -TTESTRD----VPTTRPFEASTPSSASLE---TTVPSVTLETTTNVPIGSTGGQVTEQTTSSPS 4535
             ..::.||    ||...|  |..|||:.|.   |..|::|....|:..:|:|...:     .:|:
  Rat  1319 VVRQAPRDGLTPVPPLAP--APRPSSSGLPAVLTPRPTLTPSRLTSPTLGTTRTPI-----PTPT 1376

  Fly  4536 EVRTTIRVEESTLPSRSADR-----TTLSESPETPTTLP----SDFTIR---PHSEQTTESTRDV 4588
            .||..:::..|..|..||..     .|:|.|...|::||    |..||.   |.|.....||..|
  Rat  1377 LVRPLLKLVHSPSPEVSASAPGAAPMTISSSLHMPSSLPGPASSSMTIHNSSPLSSPVVSSTVSV 1441

  Fly  4589 PTTRPFEASTPS----PASLETTVPSVTSETTTNVPIGSTG-GQVTGQTTAPPSEFRTTIRVEES 4648
            |.:.....|.|:    |||...|:|     .|..:|:...| ..:||.|.|       ...|..:
  Rat  1442 PVSSSLPISVPTTLPVPASAPLTIP-----ITAPLPVSDLGPALLTGVTPA-------LAVVSAA 1494

  Fly  4649 TLPSRSTDRTTPSES------PETPTILPSDSTTRTYSDQTTESTRDVPTTRPFEASTPSPASLE 4707
            :.|..::...:||.|      ..||.:.|..::..:....||.|  .||...    |..:||...
  Rat  1495 SGPPLASAGVSPSVSALALGLATTPALSPPQTSGHSLLLATTSS--HVPGLN----SAVAPACSP 1553

  Fly  4708 TTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTL 4772
            ..||:..|  |:..||             |||              |..|..:..:.:|.|...|
  Rat  1554 VLVPASAL--TSPFPI-------------SPS--------------SAPAQASLLAPAPSTSQAL 1589

  Fly  4773 PSDFITRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTT 4837
            .:.......|:.|...    |:..|..|..|..|:.:|.:|::|..:.:..|:.|          
  Rat  1590 ATSLAPMAASQTTILG----PSPTPPLAPLPVLAASQTPLPAMTPPSMSGAPLPS---------- 1640

  Fly  4838 SSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDVPTTRPFEA 4902
                          |||.|             .||:     :..|.|.:|..||   |.:.|.. 
  Rat  1641 --------------STLVS-------------APTS-----VLAPSSTQTLVST---PVSSPLS- 1669

  Fly  4903 STPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSTDRTTPS 4967
               |.||.:|...:.||..|       .||....||.|                        ..:
  Rat  1670 ---SLASTQTLTLAPTLAPT-------LGGLSPSQTHS------------------------LGT 1700

  Fly  4968 ESPETPTTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGST 5032
            .||:.|.                          |.:..:.:|||.....|:.||......|:|.|
  Rat  1701 GSPQGPF--------------------------PIQTLSLTPASSLVPTPAQTLSLAPGGPVGPT 1739

  Fly  5033 GGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRTYSDQTTESTRD 5097
                                             .|.|.:|.:|.. |:...|.|.:...:.::..
  Rat  1740 ---------------------------------QTLSLAPSSPVG-PAPAHTLTLAPAASSASLL 1770

  Fly  5098 VPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEFRTTIRVE-ESTLP 5161
            |||:......:|:|..:.|..||.| :|....|         ..|.||.|:..:.:... .::||
  Rat  1771 VPTSVQTLTLSPAPVPVPTLDPSAT-QTLALAP---------ALTQAPASQASSLVSASGAASLP 1825

  Fly  5162 SRSTDR-TTPSESPETPTTLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPAS---LETTVPS 5222
            ....:| ..|.:.|||.|     ..:.|.|...|.::...|  ||.....|.|.|   |::    
  Rat  1826 VTMVNRLPVPKDEPETLT-----LRSGPPSPLPTATSFSGP--RPRRQPPPPPRSPFYLDS---- 1879

  Fly  5223 VTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTLPSDFTT 5287
                             :.|:.....||     |:|.....|.:.....|....|.    .||.|
  Rat  1880 -----------------LEEKRKQQRSE-----RLERIFQLSEAHGALAPVYGTEV----LDFCT 1918

  Fly  5288 RPHSEQTTESTRDVPATRPFEASTPSPASLETTVPSVTSEATTNVPIGSTGGQVTEQTTSSPSEV 5352
            .|.           |...|....:|.|:.                ||..|..:...|....|.: 
  Rat  1919 LPQ-----------PVASPIGPRSPGPSH----------------PIFWTYTEAAHQAVLFPQQ- 1955

  Fly  5353 RTTIRVEE-STLPSRSTDRTSPSESPETPTTL----PSDFTTRPHS---DQTTECTRDVPTTRPF 5409
                |::: |.:..|......|.|:|  |.:|    |..:.. ||.   .:...|.. .|..||.
  Rat  1956 ----RLDQLSEIIERFIFVMPPVEAP--PPSLHACHPPPWLA-PHQAAFQEQLACEL-WPRARPL 2012

  Fly  5410 EASTPSSASLETTVPSVTL-----------------------------ETTTNVPI--------- 5436
            ....   .::.|..|.:.|                             :.|..:.:         
  Rat  2013 HRIV---CNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHG 2074

  Fly  5437 -------GSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRS---------ADRTTPSESPETPTLP 5485
                   |||.   .||..:.........|:....|.:||         ||.....:|...||:.
  Rat  2075 HLYLRLDGSTR---VEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMD 2136

  Fly  5486 SDFTTRPHSEQTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTTS 5550
            :....|.|   ....||||...|                                  .::|:|  
  Rat  2137 AQAQDRCH---RIGQTRDVHIYR----------------------------------LISERT-- 2162

  Fly  5551 SPSEFRTTIRVEESTLPSRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTRPFEAST 5615
                      |||:.|...:..|.....:.|    ..:|||....:||.....|:|...|     
  Rat  2163 ----------VEENILKKANQKRMLGDMAIE----GGNFTTAYFKQQTIRELFDMPLEEP----- 2208

  Fly  5616 PSPASLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEVRTTIRVEESTLPSRSTDRTTPSES 5680
              |.|..::||....||..:                           :::.:..::..|....|.
  Rat  2209 --PGSSVSSVPEEEEETVAS---------------------------KQTHILEQALCRAEDEED 2244

  Fly  5681 PETPTILPSDSTTRTYSDQTTE-----STRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPI 5740
            ..        :.|:..::|..|     .....|.....|||.|.|.:.:..:.....|....|  
  Rat  2245 IR--------AATQAKAEQVAELAEFNENEGFPAGEGEEASRPGPGAEDEEMSRAEQEIAALV-- 2299

  Fly  5741 GSTGGQVTGQTTATPSEVRTTIGVEESTLPSRSTDRTSPSE------------SPETPTTLPSDF 5793
                      ...||.| |..:...|::|...|.:....:|            :.|....||.:.
  Rat  2300 ----------EQLTPIE-RYAMKFLEASLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEE 2353

  Fly  5794 TTRPHS-DQTTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTEQTTSSP 5857
            ...|.: |:.:.:|..|...|  .....:|..|.|.|    ||........:.|...| ..|||.
  Rat  2354 EEGPGAGDEMSCATSGVSHRR--SKKVKAPERLGTRV----SERLRGARAETQGANHT-PVTSSH 2411

  Fly  5858 SEVRTTIGLEESTLPSRSTDRTSPSESPETPTTLPSDFITRPHSDQTTESTRDVPTTRPFEASTP 5922
            ....|.:....|.:..| ..|..|:..|..|...|:            .|....|...|   ..|
  Rat  2412 QTCNTFVPPRCSPVRER-IPRPRPAPPPAPPAPPPA------------ASPAPAPAPAP---PAP 2460

  Fly  5923 SPASLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEVRTTIGVEESTLPSRSTDRTSPSESP 5987
            .|..|...:|.|..      |..:...........||:...:......|.:.|.......|..:|
  Rat  2461 PPPVLPPVLPPVPP------PPPAPSPPAPSPAPPPPAPAASVASAPASAITSSLATAPIPISAP 2519

  Fly  5988 ETPTTLPSDFITRP---------HSEQTT--ESTRDVPTTRPFEAST-----PSPASLKTTVPSV 6036
            ...|.||...:..|         .|..:|  .:...:||..|..|.|     .|||.| .::|..
  Rat  2520 NPVTILPVHILPSPAPLLQLPPCSSPASTPPSACTPLPTCTPLPAQTSLLTSSSPAPL-DSLPVP 2583

  Fly  6037 TSEATTNVPIGSTGQRIGT---TPSESPETP----------------TTLPSDFTTRPHSEKTTE 6082
            .|...||:.:.|....:.|   .|.||.|.|                ..||......|.|||   
  Rat  2584 ISPGVTNLLLDSGEVEVCTQELAPVESLELPGMTNSEASLVSLVPPNDLLPVAVDVLPESEK--- 2645

  Fly  6083 STRDVPTTRPFETSTPSPASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEES 6147
               ::|..         ||      ||.||| ..::|        .:|....|..|..|.|   :
  Rat  2646 ---NLPLI---------PA------PSSTLE-AESIP--------DDQEQEVPGSVEGTNR---T 2680

  Fly  6148 TLPSRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTP-----SPASL--- 6204
            .||.......:.|||......||..:..|  .|..|:.|::..||  |..||     .|..|   
  Rat  2681 LLPGGGELTVSLSESNGLELPPSAASDEP--LQLLETHRNLEDTR--EVQTPVSNSEKPQELVRA 2741

  Fly  6205 ETTVPSVTSETTTNVPIG---------------STGGQVTGQTTAPPSEV-------RTTIGVEE 6247
            |.|.|| ||.:.|:.|.|               ...||.:|:|..||...       |....|||
  Rat  2742 EVTAPS-TSSSATSSPEGPLPARPPRRRTSADVEIRGQGSGRTGQPPGPKVLRKLPGRLVTVVEE 2805

  Fly  6248 STLPSRSTDRTSP----------SESPETPTTLPSDFITRPHSEQTTESTRDVPTTRPFEASTPS 6302
            ..|..|...|.:.          |.||.:|:.         ||....||:  .|::.|.||   :
  Rat  2806 KELVKRRRHRATASTLVPGVSEVSASPRSPSI---------HSMSGPESS--PPSSGPCEA---A 2856

  Fly  6303 PASLKTTVPSVTSEATTNVPIGSTGGQVTE----------------------QTTSSPSEVRTTI 6345
            |.|..:|....|..|..:..:|.|||...|                      :...||::....:
  Rat  2857 PTSSLSTPTQHTFIACRHNELGITGGGSPENGEGAKLAITPPAVKRRRGRPPKKNRSPADAGRGV 2921

  Fly  6346 RVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHS-----------------EKTTE----ST 6389
            ....|::....|:...|...|||.|...::...:|..                 ||...    ..
  Rat  2922 DEAPSSISKGKTNGVDPIPGPETVTATAAEPDLKPQPLAPQPVHKPEPIILSPVEKRRRGRPPKA 2986

  Fly  6390 RDVPTTRPFETSTPSPASLETTVPSVTLETTTSVPMGSTGGQVTGQTTAPPSEVRTTIRVEESTL 6454
            ||:|.  |...|:|...:||:        .|..:|..:|   :|.....|.:...|...|..||.
  Rat  2987 RDLPI--PGTISSPGDGNLES--------RTQPLPFPAT---LTPLLACPTAVANTVTTVTISTS 3038

  Fly  6455 PSRSTDRTSPSESPETPTTLPSDF-ITRPHSEKTTESTRDVPTTRPFEASTPSSASSGNNCSISY 6518
            |.: ..|..|.::|.:|.  ||.. :..|.|....||.......:|...:....:||..:.|...
  Rat  3039 PPK-RKRGRPPKNPPSPR--PSQHPVLDPDSSSVLESCGLGVQRQPLGQAESEGSSSDEDGSRPL 3100

  Fly  6519 FRNHYKCSNRFNRSADRTTPSE-SPETPTLPSDFTTRPHSEQTTESTRDVPTTRP-FEASTPSPA 6581
            .|   ....|......|...|| |.....:..|...........|.|..|.:..| |.::...|.
  Rat  3101 TR---LARLRLEAEGMRGRKSEGSMVMAVIQDDLDLADSGPSGLELTPPVVSLTPKFRSTRLRPG 3162

  Fly  6582 SLETTVPSVTSE----TTTNVPIGSTGGQVTGQTTAPPSEVRTTIRVEESTLPSRSTDRTTPSES 6642
            ||   ||.:.:|    ..:..|:||:|....|: ..|||.:.....||||...:...:    .|.
  Rat  3163 SL---VPPLETEKMPRKRSGAPVGSSGMAKRGR-LQPPSPLGPEGSVEESEAEASGDE----EEG 3219

  Fly  6643 PETPTILPSDFTTRPHSDQTTESTRDVPTT-----RPFEASTPRPVTLET 6687
            ..||.             :.|...|.|.||     |...:|.|..:::.|
  Rat  3220 DGTPR-------------RRTGPRRLVGTTNQGDQRILRSSAPPHLSIPT 3256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572 48/215 (22%)
DUF4696 4127..4678 CDD:292395 145/616 (24%)
DUF4758 4275..4448 CDD:292572 37/185 (20%)
DUF4758 4377..4574 CDD:292572 57/230 (25%)
DUF4758 4581..4754 CDD:292572 43/183 (23%)
DUF4758 4683..4847 CDD:292572 34/163 (21%)
DUF4758 4785..4964 CDD:292572 36/178 (20%)
DUF4696 4841..5385 CDD:292395 107/553 (19%)
DUF4758 4887..5098 CDD:292572 37/210 (18%)
DUF4758 5193..5371 CDD:292572 32/181 (18%)
DUF4758 5294..5487 CDD:292572 42/254 (17%)
DUF4758 5445..5650 CDD:292572 40/213 (19%)
DUF4758 5700..5877 CDD:292572 39/194 (20%)
DUF4696 5756..6396 CDD:292395 171/770 (22%)
DUF4758 5802..5979 CDD:292572 35/176 (20%)
DUF4758 5964..6171 CDD:292572 56/241 (23%)
DUF4758 6181..6360 CDD:292572 57/240 (24%)
DUF4696 6339..6999 CDD:292395 84/382 (22%)
DUF4758 6662..6839 CDD:292572 9/31 (29%)
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
SrcapXP_017445721.1 HSA 127..196 CDD:400077
DEXQc_SRCAP 626..848 CDD:350761
PHA03247 <995..1502 CDD:223021 141/604 (23%)
PHA03247 <1272..1857 CDD:223021 178/804 (22%)
SF2_C_SNF 2023..2158 CDD:350180 24/174 (14%)
mukB <2244..>2337 CDD:235316 19/113 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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