DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Ndg

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_610575.1 Gene:Ndg / 36089 FlyBaseID:FBgn0026403 Length:1350 Species:Drosophila melanogaster


Alignment Length:1061 Identity:240/1061 - (22%)
Similarity:340/1061 - (32%) Gaps:414/1061 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 CQDPAIAARCVENAECCNLPAHFLCKCKDGYEGD----GEVLCTDVDECRNPEN-CGPNALCTNT 231
            |.|.  .|.||||:.|......:.|.|..|:...    |..:|.|:|||....: |..||:|.||
  Fly   549 CNDG--TADCVENSVCVPYEDTYRCDCYHGFAAQLDERGVEVCLDIDECATGSHVCDENAVCDNT 611

  Fly   232 PGNYTCSCPDGYVGNNPYREGC---QDVDECSYPNVCGPGAICTNLEGSYRCDCPP--------- 284
            .|.:.|.|.:|:.||. ||  |   ...|...||..         :||.......|         
  Fly   612 EGGFNCYCTEGFEGNG-YR--CLSNSTADNIEYPPA---------VEGQAEPTSEPSPNPSPYPD 664

  Fly   285 -GYDGDGRSESGCVDQ---------------DECARTPCGRNADCLNTDGSFRCLCPDGYSGDPM 333
             |.|.:...|.....|               |||.|  |.::|||...    ||.|.:|:.||..
  Fly   665 QGQDQEREREDDQYPQPNPYPYPEEQIPQHPDECYR--CSKDADCYQG----RCTCHEGFDGDGY 723

  Fly   334 -------------NG-CE-------DVDECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHA 377
                         || ||       |||..           |..||   :||||.|:.|..|   
  Fly   724 TCTNICGHGEVWENGRCEPLLLERHDVDPL-----------CDALG---ECRCPYGYELSED--- 771

  Fly   378 DQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGS---Y 439
                    :|:..|      :..:.....|.|...|:||        .|..||.| |:.|.   :
  Fly   772 --------SQRCTY------VQEFDGERNADLIPCDVDE--------NCHINATC-NWYGQELRH 813

  Fly   440 RCLCPSGFQGQGYLHCENINE--CQDNP--CGENAICT--DTVGSFVCTCKPDYTGDPFRGCVDI 498
            .|.|..||:|.|| :|:.|::  |...|  |..:|.|.  :.:|...|.|:..|||:        
  Fly   814 ICTCQPGFRGDGY-NCDPISDDSCAIRPDICDVHADCVYEEHLGKSECQCQAGYTGN-------- 869

  Fly   499 DECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIEN 563
                                 |:||            ::|.|       |.|...|..||.|.:.
  Fly   870 ---------------------GFNC------------QLAAE-------CQSAEHCGENAFCDDG 894

  Fly   564 QCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDV 628
            .|.|...||            |..::.|.|..:|                ||            |
  Fly   895 VCRCQADFE------------RDVSDRCVPAGRC----------------GS------------V 919

  Fly   629 RCGAHAYCKPDQNEA--YCVCEDGWTYNPSDVAAGCVDID-ECDVMHGPFGSCGQNATC--TNSA 688
            .||::|.||.|..|.  ||.|.||:   ..|...||.... .|.|::    :||.:|||  |...
  Fly   920 FCGSNAICKWDSAEGVQYCDCLDGY---QGDALTGCTSKPLSCHVLN----NCGIHATCEPTEDP 977

  Fly   689 GGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRCV 753
            ..:.|.|..||.||                              ||.|....|.:.:|       
  Fly   978 ANYECQCIAGFKGD------------------------------GYVCIEEQNCLNNP------- 1005

  Fly   754 PIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCLCAPGYT 818
                          ::||                          .:|||...|....|:|..|:.
  Fly  1006 --------------TLCD--------------------------MNAQCRSTNSGLVCVCNQGFF 1030

  Fly   819 GNSALAGGCNDIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSDANPCA 883
            ||.:|   |.:    |.:..::..|.|.  |..:.:.|  .:|...|...:....:|..  ..|.
  Fly  1031 GNGSL---CQE----RQHQDSDFLIVSQ--GVMIARVP--LNGRNVRPISVAQMAIGLD--KDCV 1082

  Fly   884 TG---------ETCVQDSYTGNSV-----------------CICRQGYERNS--ENGQCQDVDEC 920
            .|         :..|...|.|..:                 .|.|:.|..:|  :..:...:|:.
  Fly  1083 EGRVYWGDISTKKIVSTKYDGTDLRPFITTDIESPEGIAIDVISRRLYWADSAKDTIEVASLDDP 1147

  Fly   921 SVQRGKPACGLNALCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSP------------YK 973
            |::    |..:|....|         |:|...:|:  .|.....:...:||            ..
  Fly  1148 SLR----AVIINKQLVN---------PRGIAVDPY--REKLFWSDWDRESPKIEMSNLDGTGREL 1197

  Fly   974 LVG-------NSCVLSGCSSGQACPSGA-----ECI--------SIAGGVSYCACPKG------- 1011
            |:|       ||.|:.. :||:.|.:.|     |||        :|:..:||   |.|       
  Fly  1198 LLGKDDVTLPNSLVVLE-NSGEVCYADAGTKKVECIEPQNRQIRTISNELSY---PFGITFTHDQ 1258

  Fly  1012 -YQTQPDGSCVDVDECEERGA-----QLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGLCALAQRK 1070
             |.|  |.:...|:..:..||     |...||:..:........|||:      |...|.::...
  Fly  1259 FYWT--DWTTKKVEIVDSLGARQTPIQPPFFGSHKMYGMTVVEQHCPQ------YQSPCQISNGG 1315

  Fly  1071 CAADRECAANEKCIQPGECVC 1091
            |...|.|..|.:......|.|
  Fly  1316 CTDSRLCLVNRQAPSGKSCKC 1336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011 15/35 (43%)
EGF_CA 255..>286 CDD:214542 6/40 (15%)
EGF_CA 298..331 CDD:238011 13/47 (28%)
EGF_CA 338..373 CDD:238011 12/34 (35%)
EGF_CA 413..456 CDD:238011 16/45 (36%)
EGF_CA 457..490 CDD:238011 11/38 (29%)
EGF_CA 497..>529 CDD:214542 3/31 (10%)
EGF_CA 580..>612 CDD:214542 4/31 (13%)
EGF_3 676..702 CDD:289699 10/27 (37%)
EGF_CA 1022..1056 CDD:214542 9/38 (24%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
NdgNP_610575.1 NIDO 108..262 CDD:214712
EGF_3 285..320 CDD:372403
G2F 322..549 CDD:214774 240/1061 (23%)
EGF_CA 591..627 CDD:311536 15/35 (43%)
EGF_3 797..828 CDD:372403 13/32 (41%)
EGF_3 836..873 CDD:372403 12/65 (18%)
EGF_3 963..995 CDD:372403 14/65 (22%)
EGF_3 1001..1036 CDD:372403 13/84 (15%)
NHL 1059..>1275 CDD:302697 45/240 (19%)
NHL repeat 1067..1103 CDD:271320 5/37 (14%)
Ldl_recept_b 1084..1123 CDD:393440 4/38 (11%)
LY 1107..1145 CDD:214531 4/37 (11%)
NHL repeat 1117..1154 CDD:271320 7/40 (18%)
LY 1152..1195 CDD:214531 8/53 (15%)
NHL repeat 1161..1198 CDD:271320 6/38 (16%)
NHL repeat 1204..1245 CDD:271320 11/41 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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