DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and mib2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001260554.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster


Alignment Length:220 Identity:46/220 - (20%)
Similarity:73/220 - (33%) Gaps:52/220 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  6203 SLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEVRTTIGV--EESTLPSRSTDRTSPSESPE 6265
            :||.:..|...|.::......:.|...|...|||...|.|..:  :.:.:|:     .....||.
  Fly   797 ALEVSAGSADGEESSASAGAESNGAGPGSVAAPPPPQRQTFELMPKPNDIPA-----IGVGASPS 856

  Fly  6266 TPTTLPSDFITRPHSEQTTESTRDVPTTRPFEASTPSPASLKTTVPSVTSEATTNVPIGSTGGQV 6330
            ||:..|.  :.:.:|:.|.::..  |...| ....|.|       |..||.::|.:..|:.|...
  Fly   857 TPSASPG--VKKLNSDATPQNVS--PQVAP-RKKAPKP-------PVTTSSSSTALEAGAAGPST 909

  Fly  6331 TEQTTSSPSE--------------------------------VRTTIRVEES-TLPSRSTDRTTP 6362
            :......|.|                                :|..:.:|.. |:..|.....|.
  Fly   910 SPVIVPGPHECIVCNEILPMVRFEPCQHQIACEECGIRMKKCLRCAVAIERRLTVSGRVVALPTS 974

  Fly  6363 SESPETPTTLPSDFTTRPHSEKTTE 6387
            :.||..||.|||....|....|..|
  Fly   975 TSSPSDPTRLPSGDLLRYLENKVLE 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395 46/220 (21%)
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572 35/191 (18%)
DUF4696 6339..6999 CDD:292395 16/82 (20%)
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
mib2NP_001260554.1 MIB_HERC2 8..73 CDD:284184
ZZ_Mind_bomb 85..129 CDD:239079
MIB_HERC2 156..220 CDD:284184
ANK 464..582 CDD:238125
ANK repeat 464..494 CDD:293786
Ank_2 468..560 CDD:289560
ANK repeat 496..527 CDD:293786
ANK repeat 529..560 CDD:293786
Ank_5 549..604 CDD:290568
ANK 557..685 CDD:238125
ANK repeat 596..628 CDD:293786
Ank_2 601..695 CDD:289560
ANK repeat 630..662 CDD:293786
ANK repeat 664..695 CDD:293786
zf-C3HC4_3 918..961 CDD:290631 3/42 (7%)
zf-C3HC4_3 1002..1044 CDD:290631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.