DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Nell1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001032995.1 Gene:Nell1 / 338352 MGIID:2443902 Length:810 Species:Mus musculus


Alignment Length:993 Identity:224/993 - (22%)
Similarity:301/993 - (30%) Gaps:417/993 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLSSAVHSQYSQQPQPFKTNLRANSR-FRGEVFYLNLENGYFGCQVNESTEYL-------QLFN 69
            |||....:..|.:...|.:|||...|. :.|:   .|.::|:|...:.:.....       |..|
Mouse   161 LLLHVDCNRIYERVIDPPETNLPPGSNLWLGQ---RNQKHGFFKGIIQDGKIIFMPNGFITQCPN 222

  Fly    70 LSKLCDGTQDCFL----GADELSKEL-KCTNDCDKDGTKCTHGACLNGVCHCNDGYGGCNCVDKD 129
            |::.|....| ||    |..:|.:.| |.|...:...|:.  |...|  |||             
Mouse   223 LNRTCPTCSD-FLSLVQGIMDLQELLAKMTAKLNYAETRL--GQLEN--CHC------------- 269

  Fly   130 ENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVENAECCNLPAHF 194
                 ::.|.|                     :|....|.|.         .|:...|.|     
Mouse   270 -----EKTCQV---------------------SGLLYRDQDS---------WVDGDNCRN----- 294

  Fly   195 LCKCKDGYEGDGEVLCTDVDECRN----PENCGPNALCTNTPGNYTCSC-PDGYVGNNPYREG-- 252
             |.||.|           ..|||.    |.||.|::|..:..|.....| |....|.....||  
Mouse   295 -CTCKSG-----------AVECRRMSCPPLNCSPDSLPVHISGQCCKVCRPKCIYGGKVLAEGQR 347

  Fly   253 -----CQDVDECSYPNVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQD------ECARTP 306
                 |::         |..|.:....|.     |||         ..|.::|      :|.|..
Mouse   348 ILTKTCRE---------CRGGVLVKITEA-----CPP---------LNCSEKDHILPENQCCRVC 389

  Fly   307 CGRNADCLNTDGSFRCLCPDGYSGDPMNGCEDVDECATNNPCGLGAECVNLGGSFQCRCPSGFVL 371
            .|.|.                              ||....||..:||.|......|.|.:|:: 
Mouse   390 RGHNF------------------------------CAEAPKCGENSECKNWNTKATCECKNGYI- 423

  Fly   372 EHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAK---CGTNAKCI 433
                                           ...|....|.|||||     .||   |..|..|:
Mouse   424 -------------------------------SVQGNSAYCEDIDEC-----AAKMHYCHANTVCV 452

  Fly   434 NFPGSYRCLCPSGFQGQGYLHCENINEC---QDNPCGENAICTDTVGSFVCTCKPDYTGDPFRGC 495
            |.||.|||.|..|:.......|...::|   |.| |.:|||||:||....|||:|.|.|:     
Mouse   453 NLPGLYRCDCIPGYIRVDDFSCTEHDDCGSGQHN-CDKNAICTNTVQGHSCTCQPGYVGN----- 511

  Fly   496 VDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAEC 560
                           ..||                     |..||:           .|.....|
Mouse   512 ---------------GTVC---------------------KAFCEE-----------GCRYGGTC 529

  Fly   561 I-ENQCFCLDGFEPIGSSC-VDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQ 623
            : .|:|.|..||  .||.| .|||||......|..|::|:|.||.|.|||.:|:           
Mouse   530 VAPNKCVCPSGF--TGSHCEKDIDECAEGFVECHNHSRCVNLPGWYHCECRSGF----------- 581

  Fly   624 PCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDV-MHGPFGSCGQNATCTNS 687
                                    .|..||:.|  ...|:|||||.: .|    :|..::.|.|.
Mouse   582 ------------------------HDDGTYSLS--GESCIDIDECALRTH----TCWNDSACINL 616

  Fly   688 AGGFTCACP--PGFSGD-PH---------------SKCVDVDECRTGASKCGAGAECVNVPGGGY 734
            ||||.|.||  |..||| ||               .:| .|..|:.|...|...|          
Mouse   617 AGGFDCLCPSGPSCSGDCPHEGGLKHNGQVWILREDRC-SVCSCKDGKIFCRRTA---------- 670

  Fly   735 TCRCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICD--ATKRCLCPEP----NIGNDCRHPCEA 793
             |.|     .:|:..:.|           ||.   ||  .|.:||....    ..|::..|.|: 
Mouse   671 -CDC-----QNPNVDLFC-----------CPE---CDTRVTSQCLDQSGQKLYRSGDNWTHSCQ- 714

  Fly   794 LNCGAHAQCMLANGQAQC--LCAPG----YTGNSALAGGCNDIDECRANPCAEKAICSNTAGGYL 852
                   ||....|:|.|  |..|.    ||  :...|.|  ...|.::||    :..|.|....
Mouse   715 -------QCRCLEGEADCWPLACPSLSCEYT--AIFEGEC--CPRCVSDPC----LADNIAYDIR 764

  Fly   853 CQCPGGSSGDPYREGCITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDV 917
            ..|. .|||.....|.:.:..     .:||.|                                 
Mouse   765 KTCL-DSSGISRLSGAVWTMA-----GSPCTT--------------------------------- 790

  Fly   918 DECSVQRGKPACGLNALC 935
              |..:.|:..|.::.:|
Mouse   791 --CQCKNGRVCCSVDLVC 806

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 3/28 (11%)
EGF_CA 212..247 CDD:238011 12/39 (31%)
EGF_CA 255..>286 CDD:214542 6/30 (20%)
EGF_CA 298..331 CDD:238011 5/38 (13%)
EGF_CA 338..373 CDD:238011 10/34 (29%)
EGF_CA 413..456 CDD:238011 18/45 (40%)
EGF_CA 457..490 CDD:238011 16/35 (46%)
EGF_CA 497..>529 CDD:214542 2/31 (6%)
EGF_CA 580..>612 CDD:214542 15/31 (48%)
EGF_3 676..702 CDD:289699 12/27 (44%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Nell1NP_001032995.1 TSPN 29..213 CDD:214560 13/54 (24%)
VWC 273..331 CDD:302663 21/104 (20%)
EGF_CA 434..>466 CDD:214542 17/36 (47%)
EGF_3 480..515 CDD:289699 17/55 (31%)
EGF_CA 549..586 CDD:214542 17/71 (24%)
EGF_CA 596..>627 CDD:284955 16/34 (47%)
VWC 701..749 CDD:302663 14/59 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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