DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and nell2b

DIOPT Version :10

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_002661425.1 Gene:nell2b / 336082 ZFINID:ZDB-GENE-030131-8026 Length:815 Species:Danio rerio


Alignment Length:884 Identity:194/884 - (21%)
Similarity:268/884 - (30%) Gaps:374/884 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TWIVLLLS-SAVHSQYSQQPQ---PFKTNLRANSR------FRG---EVFYLNLENGYFGCQVNE 60
            |.:||.:. :.::.:..:.|.   |..||:....|      |||   :|..:.:.:||       
Zfish   159 TQVVLHIDCNRIYERIVETPSMEFPRGTNIWVGQRNDAHGFFRGVMQDVQLVVVPHGY------- 216

  Fly    61 STEYLQLFNLSKLCDGTQDCFLG---------------------ADELSKELK---CTNDCDKDG 101
               .:|..:|::.|....| |.|                     |:|..|.|.   |...|..:|
Zfish   217 ---VVQCPDLNRTCPTCND-FHGLVQKIMELQDILAKTSNKLALAEEKMKYLDGCYCERTCTLNG 277

  Fly   102 ----------TKCTHGACLNGVCHC---------------------------------------- 116
                      ..|.:..|.||...|                                        
Zfish   278 EIFRDSDAWIDGCRNCTCSNGTVECESIFCPPPQCPPDTAPIYMPGACCKECQPVCLFRGRVYVE 342

  Fly   117 ------NDGYGGC---NCVDKDENECKQRPC-DVFAHCTNTLG-SFTCTCFPGYRGNGFHCEDID 170
                  :|..|.|   .|.|:.....:...| |:  :|..:.. :.|..|....||:.|..|   
Zfish   343 GDRKSIHDSEGNCLLFECRDRSMRRVEMTSCPDL--NCPESEQITLTDRCCKVCRGHDFCTE--- 402

  Fly   171 ECQDPAIAARCVENAECCNLPAHFLCKCKDGYEG--DGEVLCTDVDECRNPEN-CGPNALCTNTP 232
                 ..:..||||::|.||.|...|.||:||..  |....|.|:|||...:: |..|.:|.|||
Zfish   403 -----GYSRNCVENSDCINLEAGACCSCKEGYHALRDDSAYCQDIDECAEGKHYCRENTVCMNTP 462

  Fly   233 GNYTCSCPDGYVGNNPYREGCQDVDECSYP-NVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGC 296
            |::.|.|..|:|..:.|  .|.:.|||... |.|...|:|.|..|.:.|.|.|||.|:|   :.|
Zfish   463 GSFMCVCHTGFVRIDDY--SCTEHDECVRGLNTCDENALCFNTVGGHSCSCKPGYIGNG---TFC 522

  Fly   297 VDQDECARTPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCEDVDECATNNPCGLGAECVNLGGSF 361
                   |..|  ...||| .||  |:.||                                   
Zfish   523 -------RALC--EGQCLN-GGS--CVAPD----------------------------------- 540

  Fly   362 QCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLAC-LDIDECNQPDGVAK 425
            .|.|..||                                     .|..| .|||||:  ||..:
Zfish   541 TCVCQQGF-------------------------------------TGKRCETDIDECS--DGFVE 566

  Fly   426 CGTNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDNPCGENAICTDTVGSFVCTCKPDYTGD 490
            |.:.|.|:|.||.|.|.|..|:...|.....          ||:                     
Zfish   567 CDSRATCVNLPGWYHCECRDGYHDNGMFSAN----------GES--------------------- 600

  Fly   491 PFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCT 555
                |.|||||......|....:|.|...||:|:||.|.:                 |:.  ||.
Zfish   601 ----CEDIDECEMGRHSCANDTICFNVDGGYDCRCPHGRN-----------------CTG--DCA 642

  Fly   556 NNAECIEN-QCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRM 619
            ::.:...| |.:.||.           |.|..                   |.|::|.| ...||
Zfish   643 HDGKVKHNGQIWVLDD-----------DRCSV-------------------CSCQSGLV-MCRRM 676

  Fly   620 A--CKQPCEDVRC----------------GAHAYCKPD---QNEAYCVCEDG----WTYNPSDVA 659
            .  |:.|..||.|                |..||...:   :|...|.|..|    |       .
Zfish   677 VCDCENPTVDVLCCPECDPRLSSQCLHQNGLLAYSNGETWVENCQQCQCMRGEVDCW-------P 734

  Fly   660 AGCVDIDECDVMHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGA 724
            ..|..:.:|:....|.|.|                ||         :|| .|.|.....:.....
Zfish   735 VSCAPVSDCEFTVVPDGEC----------------CP---------RCV-TDPCLADTVRNDITK 773

  Fly   725 ECVN------VPGGGYT--------CRCP-GNTIADPDP 748
            .||:      ..|..:|        |:|. |:.....||
Zfish   774 TCVDEYGISRFSGSAWTKHGTECSLCQCKNGHICCSVDP 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:463759 8/30 (27%)
EGF_CA 212..247 CDD:238011 15/35 (43%)
EGF_CA 255..>286 CDD:214542 12/31 (39%)
EGF_CA 298..331 CDD:238011 10/32 (31%)
EGF_CA 338..373 CDD:238011 4/34 (12%)
EGF_CA 413..456 CDD:238011 18/42 (43%)
EGF_CA 457..490 CDD:238011 2/32 (6%)
EGF_CA 497..>529 CDD:214542 13/31 (42%)
EGF_CA 580..>612 CDD:214542 4/31 (13%)
EGF_3 676..702 CDD:463759 4/25 (16%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
Herpes_BLLF1 <4032..4489 CDD:282904
Herpes_BLLF1 <4334..4797 CDD:282904
PHA03255 4845..>5021 CDD:165513
DUF5585 4959..5356 CDD:465521
PHA03247 <5170..5799 CDD:223021
PRK12495 <5749..5877 CDD:183558
PHA03247 <5865..6485 CDD:223021
Chi1 6385..>6609 CDD:442692
Herpes_BLLF1 <6607..7102 CDD:282904
Herpes_BLLF1 <7027..7490 CDD:282904
DUF5585 7550..7954 CDD:465521
DUF5585 7881..>8130 CDD:465521
Atrophin-1 18652..>19081 CDD:460830
PHA03247 <18873..19514 CDD:223021
ZP 22576..22811 CDD:214579
nell2bXP_002661425.1 LamG 28..213 CDD:473984 12/53 (23%)
VWC 273..329 CDD:450195 7/55 (13%)
EGF_CA 441..469 CDD:429571 12/27 (44%)
EGF_3 487..522 CDD:463759 14/37 (38%)
EGF_CA 556..590 CDD:214542 17/35 (49%)
EGF_CA 603..634 CDD:429571 13/30 (43%)
VWC 641..693 CDD:450195 18/82 (22%)
VWC 710..757 CDD:214564 13/78 (17%)
Blue background indicates that the domain is not in the aligned region.

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