DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and nell2b

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_002661425.1 Gene:nell2b / 336082 ZFINID:ZDB-GENE-030131-8026 Length:815 Species:Danio rerio


Alignment Length:884 Identity:194/884 - (21%)
Similarity:268/884 - (30%) Gaps:374/884 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TWIVLLLS-SAVHSQYSQQPQ---PFKTNLRANSR------FRG---EVFYLNLENGYFGCQVNE 60
            |.:||.:. :.::.:..:.|.   |..||:....|      |||   :|..:.:.:||       
Zfish   159 TQVVLHIDCNRIYERIVETPSMEFPRGTNIWVGQRNDAHGFFRGVMQDVQLVVVPHGY------- 216

  Fly    61 STEYLQLFNLSKLCDGTQDCFLG---------------------ADELSKELK---CTNDCDKDG 101
               .:|..:|::.|....| |.|                     |:|..|.|.   |...|..:|
Zfish   217 ---VVQCPDLNRTCPTCND-FHGLVQKIMELQDILAKTSNKLALAEEKMKYLDGCYCERTCTLNG 277

  Fly   102 ----------TKCTHGACLNGVCHC---------------------------------------- 116
                      ..|.:..|.||...|                                        
Zfish   278 EIFRDSDAWIDGCRNCTCSNGTVECESIFCPPPQCPPDTAPIYMPGACCKECQPVCLFRGRVYVE 342

  Fly   117 ------NDGYGGC---NCVDKDENECKQRPC-DVFAHCTNTLG-SFTCTCFPGYRGNGFHCEDID 170
                  :|..|.|   .|.|:.....:...| |:  :|..:.. :.|..|....||:.|..|   
Zfish   343 GDRKSIHDSEGNCLLFECRDRSMRRVEMTSCPDL--NCPESEQITLTDRCCKVCRGHDFCTE--- 402

  Fly   171 ECQDPAIAARCVENAECCNLPAHFLCKCKDGYEG--DGEVLCTDVDECRNPEN-CGPNALCTNTP 232
                 ..:..||||::|.||.|...|.||:||..  |....|.|:|||...:: |..|.:|.|||
Zfish   403 -----GYSRNCVENSDCINLEAGACCSCKEGYHALRDDSAYCQDIDECAEGKHYCRENTVCMNTP 462

  Fly   233 GNYTCSCPDGYVGNNPYREGCQDVDECSYP-NVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGC 296
            |::.|.|..|:|..:.|  .|.:.|||... |.|...|:|.|..|.:.|.|.|||.|:|   :.|
Zfish   463 GSFMCVCHTGFVRIDDY--SCTEHDECVRGLNTCDENALCFNTVGGHSCSCKPGYIGNG---TFC 522

  Fly   297 VDQDECARTPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCEDVDECATNNPCGLGAECVNLGGSF 361
                   |..|  ...||| .||  |:.||                                   
Zfish   523 -------RALC--EGQCLN-GGS--CVAPD----------------------------------- 540

  Fly   362 QCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLAC-LDIDECNQPDGVAK 425
            .|.|..||                                     .|..| .|||||:  ||..:
Zfish   541 TCVCQQGF-------------------------------------TGKRCETDIDECS--DGFVE 566

  Fly   426 CGTNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDNPCGENAICTDTVGSFVCTCKPDYTGD 490
            |.:.|.|:|.||.|.|.|..|:...|.....          ||:                     
Zfish   567 CDSRATCVNLPGWYHCECRDGYHDNGMFSAN----------GES--------------------- 600

  Fly   491 PFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCT 555
                |.|||||......|....:|.|...||:|:||.|.:                 |:.  ||.
Zfish   601 ----CEDIDECEMGRHSCANDTICFNVDGGYDCRCPHGRN-----------------CTG--DCA 642

  Fly   556 NNAECIEN-QCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRM 619
            ::.:...| |.:.||.           |.|..                   |.|::|.| ...||
Zfish   643 HDGKVKHNGQIWVLDD-----------DRCSV-------------------CSCQSGLV-MCRRM 676

  Fly   620 A--CKQPCEDVRC----------------GAHAYCKPD---QNEAYCVCEDG----WTYNPSDVA 659
            .  |:.|..||.|                |..||...:   :|...|.|..|    |       .
Zfish   677 VCDCENPTVDVLCCPECDPRLSSQCLHQNGLLAYSNGETWVENCQQCQCMRGEVDCW-------P 734

  Fly   660 AGCVDIDECDVMHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGA 724
            ..|..:.:|:....|.|.|                ||         :|| .|.|.....:.....
Zfish   735 VSCAPVSDCEFTVVPDGEC----------------CP---------RCV-TDPCLADTVRNDITK 773

  Fly   725 ECVN------VPGGGYT--------CRCP-GNTIADPDP 748
            .||:      ..|..:|        |:|. |:.....||
Zfish   774 TCVDEYGISRFSGSAWTKHGTECSLCQCKNGHICCSVDP 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 8/30 (27%)
EGF_CA 212..247 CDD:238011 15/35 (43%)
EGF_CA 255..>286 CDD:214542 12/31 (39%)
EGF_CA 298..331 CDD:238011 10/32 (31%)
EGF_CA 338..373 CDD:238011 4/34 (12%)
EGF_CA 413..456 CDD:238011 18/42 (43%)
EGF_CA 457..490 CDD:238011 2/32 (6%)
EGF_CA 497..>529 CDD:214542 13/31 (42%)
EGF_CA 580..>612 CDD:214542 4/31 (13%)
EGF_3 676..702 CDD:289699 4/25 (16%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
nell2bXP_002661425.1 LamG 28..213 CDD:304605 12/53 (23%)
VWC 273..329 CDD:302663 7/55 (13%)
EGF_CA 441..>473 CDD:284955 13/31 (42%)
EGF_3 487..522 CDD:289699 14/37 (38%)
EGF_CA 556..590 CDD:214542 17/35 (49%)
EGF_CA 603..>634 CDD:284955 13/30 (43%)
VWC 641..693 CDD:302663 18/82 (22%)
VWC 710..757 CDD:214564 13/78 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12107
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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