DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and tyn

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster


Alignment Length:830 Identity:191/830 - (23%)
Similarity:294/830 - (35%) Gaps:272/830 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly 22210 RQGFEGNPEFECSKIECSINSDCPG-THVCRNQLCIPACQGEQCGSNAQCLAIEHRAVCECIPGH 22273
            |..||...:|           |.|| |:.....|.:..||| .|...|.|.|.....|       
  Fly    37 RMAFEKLTDF-----------DFPGNTYYSVKNLSLYECQG-WCREEADCQAAAFSFV------- 82

  Fly 22274 GGNARIACTPLGCRSDDECPTDKACVNGKCNDPCTTTALCAQDELCKVYH------------HRP 22326
                   ..||....:..|...        ||........|......:|:            |||
  Fly    83 -------VNPLSPSQETHCQLQ--------NDSSAANPSAAPQRSANMYYMIKLQLRSENVCHRP 132

  Fly 22327 QCACPPGTVPGKNGCESERHIPICISDAD-----CPSQKACLRGECVNPCNATQPCGVNAFCSVR 22386
            ...   ..||.|           .|...|     ..:::||| ..|:|.                
  Fly   133 WSF---ERVPNK-----------VIRGLDNALIYTSTKEACL-SACLNE---------------- 166

  Fly 22387 DTLPVRTMICECLEGYTGNPAVQC-----DKRSLCVIEKGFVRDVDGQCVCPPGTALDIYE-YC- 22444
                 |..:|..:|....|  ::|     |:||    ...||:.||.|     ||  |.:| .| 
  Fly   167 -----RRFVCRSVEYDYNN--MKCVLSDSDRRS----SGQFVQLVDAQ-----GT--DYFENLCL 213

  Fly 22445 ---TPCREEQGF---------------------------RIDESGHCVCALERGMVIDERGRCTC 22479
               ..|:..:.|                           ::.....|..|.|    |:....|..
  Fly   214 KPAQACKNNRSFGNSQKMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACE----IESEFLCRS 274

  Fly 22480 PIDLGYRLTPRGECQPEEPPECTSNDQCADNRFCNLDTKTCEDPCLTKVCGVNAFCN----AVNH 22540
            .:.||   .|:|           |...|   |..:||.||..|       |.:.:.|    .::|
  Fly   275 FLYLG---QPQG-----------SQYNC---RLYHLDHKTLPD-------GPSTYLNHERPLIDH 315

  Fly 22541 --------RAQCQCITGY-TGNP----------------------------DLHCNHTNFRTDFP 22568
                    ..||:...|. .|:|                            |::|:.|.  |.: 
  Fly   316 GEPIGQYFENQCEKAAGLGAGSPPGTLDKIDTLPVSLDTIEDPNLTNLTRNDVNCDKTG--TCY- 377

  Fly 22569 RPDMVVSCLADGVQVEIHITEPGFNGVLYVKGHSKDEECR-RVVNLAGETVPRTEIFRVHF---- 22628
              |:.|.|....:.|::...:| |||.:|..|.|  |.|. .|:|        ::.||:..    
  Fly   378 --DVSVHCKDTRIAVQVRTNKP-FNGRIYALGRS--ETCNIDVIN--------SDAFRLDLTMAG 429

  Fly 22629 GSCGMQAVKDVASFVLVIQKHPKLVTYKAQAYNIKCVYQTGEKNVTLGF----NVSMLTTAGTIA 22689
            ..|..|:|..|.|..:|:|.|..::|...:.|.:||.|....||:|.|.    :..|:..  ..:
  Fly   430 QDCNTQSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFGMMPIRDPEMIHI--NSS 492

  Fly 22690 NTGPPPICQMRIITNEGEEINSAEIGDNLKLQVDVEPATIYGGFARSCIAKTMEDNVQNEYLVTD 22754
            ...|||  ::||:.....|:.:..|||.|..::::...|.||.|||||:|  |..:.:..:.:.|
  Fly   493 PEAPPP--RIRILDTRQREVETVRIGDRLNFRIEIPEDTPYGIFARSCVA--MAKDARTSFKIID 553

  Fly 22755 ENGCATDTSIFGNWEYNPDTNSLLASFNAFKFPSSDNIRFQCNIRVCFGRCQPVNC----GGYNA 22815
            ::||.||.:||..  :..|.|:|.:::.||:|..|..:.||||::.|.|.|:|..|    ..:.:
  Fly   554 DDGCPTDPTIFPG--FTADGNALQSTYEAFRFTESYGVIFQCNVKYCLGPCEPAVCEWNMDSFES 616

  Fly 22816 FG-RRRRSIADNSTDATAIATNSGVEGQLREEITISSN-AILTF--EKRSGQGLNDANIKPAAQR 22876
            .| ||||||..|.|.:             .:::.||.. .:|.|  |||     ......|:...
  Fly   617 LGRRRRRSIESNDTKS-------------EDDMNISQEILVLDFGDEKR-----EFFKADPSTDF 663

  Fly 22877 VEDICVSMV------GLIIALVITALLALVAVAVAVSCWLMAYRRRPKTI 22920
            .:|..|:::      ..::||.:|..|.::.....:.|:.|....:|..|
  Fly   664 AKDKTVTIIEPCPTKTSVLALAVTCALMILLYISTLFCYYMKKWMQPHKI 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579 76/247 (31%)
Zona_pellucida <22714..22810 CDD:278526 36/95 (38%)
tynNP_001027032.1 PAN_4 46..97 CDD:405052 17/76 (22%)
PAN_AP_HGF 131..210 CDD:238532 28/127 (22%)
PAN_1 236..327 CDD:394981 20/118 (17%)
ZP 382..598 CDD:214579 71/234 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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