DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Siglec1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017447235.1 Gene:Siglec1 / 311426 RGDID:1311953 Length:1708 Species:Rattus norvegicus


Alignment Length:1774 Identity:344/1774 - (19%)
Similarity:557/1774 - (31%) Gaps:531/1774 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  4229 SEVR-TTIGLEESTLPSRSTDRTTPSESPETPTTLPSDFITRPHSDQTTESTR-DVPTTRPFEAS 4291
            |:|| ||:               |.::.|..||      ||.||  :..|... :|..:.|:...
  Rat   126 SDVRGTTV---------------TVTKDPSPPT------ITIPH--ELREGVEVNVNCSTPYLCL 167

  Fly  4292 TPSSASLETTVPSVTLETTTNV-PIGSTGGQVTEQTT--SSPS--EVRTTIRVEESTLPSRSADR 4351
            .....||.......|....:|. .:..||  |..|||  .:||  :.|.|:|.:.| |.:.|:.:
  Rat   168 QEKQVSLHWQGQDPTRSVISNFQSLEPTG--VYHQTTLHMAPSWQDHRRTLRCQLS-LATHSSQK 229

  Fly  4352 TTPSESPETP------------TTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTV 4404
            ....:....|            ..||.:..|               .|....:|.|:.:|::...
  Rat   230 EVYLQVQHAPKGVEILLSSSGRNILPGNLVT---------------LTCRVNSSYPAVSSVDWVK 279

  Fly  4405 PSVTLETTTNV-----PIGSTGGQVTGQTT------SSP--------SEVRTT-----IRVEEST 4445
            ..|.|....:|     ...:..|..|.|.|      :||        :||:..     :..|..|
  Rat   280 DGVNLTAKGHVLQLSSATWNDSGVYTCQATNNVGSLASPPLSLHVFMAEVKINPAGPILENETVT 344

  Fly  4446 LPSRSADRTTPSESPE-----------------TPTT-LPSDFITRPHSEKTTESTRDVPTTRPF 4492
            |..     :||.|:|:                 .||. ||:  :||   ..|.....:|..|:..
  Rat   345 LLC-----STPKEAPQELRYSWYKNNILLEDAHAPTLHLPA--VTR---ADTGFYFCEVQNTQGS 399

  Fly  4493 EASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEES--TLPSRSAD- 4554
            |.|.|  .|:....|.:|.:.||.  :.:..|.|.....|..||...|:.:...  ||.|.|.: 
  Rat   400 ERSGP--VSVVVRYPPLTPDLTTF--LETQAGLVGIFHCSVISEPLATVVLSHGGLTLASSSGEN 460

  Fly  4555 ----RTTLSESPETPTTLPSDFTIRPHSEQTTESTRDV---PTTRPFEAS------TPSPASLET 4606
                |.::|.:|.:......|.......|.|..:|..:   .::..|.|:      :||...:|.
  Rat   461 DFNPRFSISSAPNSVRLEIRDLQPADSGEYTCSATNSLGKSMSSLDFHANVARLLISPSKEVVEG 525

  Fly  4607 TVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEF----RTTIRVEEST----LP-SRSTD------ 4656
            ...:::..              :|...||.:.|    ...:.:|.|:    || :.|||      
  Rat   526 QAVTLSCR--------------SGLNPAPDTRFSWYLNGALLLEGSSSNFLLPAASSTDSGSYYC 576

  Fly  4657 --RTTPSES-PETPTIL-----PSDSTTRTYSDQTTESTRDVPTTRPF---EASTPSPASLE--- 4707
              |..|..| |..||:|     |...|.....|..|....|  ..|..   :..:..||.|:   
  Rat   577 RARAGPHTSGPSLPTVLTVFYPPRKLTFTARLDLDTSGDGD--GRRGILLCQVDSDPPAQLQLLH 639

  Fly  4708 ------TTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESP 4766
                  |::||:....:..:       :|:..:.|...|::..:..:|.....            
  Rat   640 KGHVVATSLPSMCGSCSRRM-------KVSRASNSLQVEIQKPVLEDEGMYLC------------ 685

  Fly  4767 ETPTTLPSDFITRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGST--- 4828
            |...||.:..::...:.|.|           ....|||...||.|..|:|...|..|.:...   
  Rat   686 EASNTLGNSSVSASFNAKAT-----------VVVITPSDTLLEGTEASLTCNVTQEVAVSPANFS 739

  Fly  4829 ---GGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTES 4890
               .|.:   .|..|.|   |:|::    |....|...              :..|..::...:.
  Rat   740 WFRNGVL---WTQGPLE---TVRLQ----PLARTDAAV--------------YACRLLTDDGAQL 780

  Fly  4891 TRDVPTTRPFEASTPS-SASLETTV--PSVTLETTTNVPIGSTG---GQVTEQTTSSPSEVRTTI 4949
            :..|..:..:....|. ||.|:...  .:|.:.|..:.|:....   |:....|:..|.      
  Rat   781 SAPVVLSVQYAPDPPKLSALLDVGQGHMAVFICTVDSYPLAHLSLFRGERLLATSLEPQ------ 839

  Fly  4950 RVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHSEQT-----TESTRDVPTTRPFEASTPSP 5009
            |:....:.:::|..:...|..|    |..:.:...|.|.|     ..|:........:...:|||
  Rat   840 RLSHGRIQAKATANSLQLEVRE----LGLEDSGNYHCEATNVLGSANSSLFFQVRGAWVQVSPSP 900

  Fly  5010 ASLETTVPSVTLETTTNVPIGST-----GGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPS 5069
            ...|.....::.:..|.||.|::     .|:..:::|||      .:|:...:|....|.. ..:
  Rat   901 ELREGQAVVLSCQVPTGVPEGTSYRWFQDGRPLQESTSS------ILRIAAISLRQAGAYH-CQA 958

  Fly  5070 ESPETPTTLPSDFITRTYSDQTTESTRDVPTTRPFEASTPSPASLET--TVPSVTSETTTNVPIG 5132
            ::|:|..                             ||..:|.||..  |...||.....:...|
  Rat   959 QAPDTAA-----------------------------ASLAAPVSLHVSYTPRHVTLSALLSTGPG 994

  Fly  5133 STGGQVTGQTTAPPSEFRT--TIRVEESTLPSRSTDRTTPSESPETPTTLPSD-------FTT-- 5186
            ..|..|....:.||:..|.  ..|:..|||..   .....|.:|.....:.|:       ||.  
  Rat   995 RYGHLVCSAQSDPPALLRLFHQNRLVASTLQG---PEELASSNPRLHVAVSSNELRLEIQFTELE 1056

  Fly  5187 --RPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIG----ST--------- 5236
              ..::.:.|.:......|..|:|.....|    ..|:.|::....|.:.    ||         
  Rat  1057 DGGTYTCEATNTLGQASATADFDAQAVRVA----VWPNATVQEGQQVNLSCLAWSTHQDSLSYTW 1117

  Fly  5237 --GGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTT--------PSESPETPTLPSDFTTRPHS 5291
              |||             ..:.|...:|||.:....|        |..:|.        .:||.:
  Rat  1118 YKGGQ-------------QLLGVRSISLPSVTVSDATSYRCGVGLPGHTPH--------LSRPVT 1161

  Fly  5292 EQTTESTRDVPATRPFEASTPSPASLETTVPSVTSEATTNVPIGSTGGQVTEQTTSSPSEVRTTI 5356
            .....:.|.:..|...|:.....|.:..||.|......|.    |.|||:.  .:|:.:.|..|:
  Rat  1162 LDVLYAPRSLQLTYLLESQGRRLALVLCTVDSRPPAQLTL----SHGGQLL--ASSTEASVPNTL 1220

  Fly  5357 RVE-ESTLPSRSTDRTSPSESP--ETPTTLP---SDFTTRPHSDQTTECTRDVPTTRPFEASTPS 5415
            |:| :...||.....:..::||  :..|:|.   .....|.:...|      ||...|...:...
  Rat  1221 RLELQDPKPSDEGLYSCSAQSPLGKVNTSLALRLEGVRVRMNPSAT------VPEGEPVTVTCED 1279

  Fly  5416 SASL---------------ETTVPSVTLETTTNVPIGSTGGQV--TEQTTSS-PSEVRTTIRVEE 5462
            .|:|               |....|:....||....|:...||  |:.|.|| |:.::......:
  Rat  1280 PAALSPALYAWFHNGHWLQEGPASSLQFPVTTQAHAGAYFCQVHDTQGTRSSRPASLQILYAPRD 1344

  Fly  5463 STLPSRSADR---------TTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSSA 5518
            :.|.|....|         |..||.|....|             :.:::.:..:|...:|.|..:
  Rat  1345 AVLSSFRDSRTRHMVVIQCTVDSEPPAELVL-------------SRNSKVLAASRELHSSAPGIS 1396

  Fly  5519 SLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEFRTTIRVEESTLPSRSADRTTPSESPETP 5583
            .::....::.|             ||.:.|....:.:..|.|   :||.|.|   ||.....||.
  Rat  1397 HVQAARNALRL-------------QVQDTTFGDGNTYVCTAR---NTLGSIS---TTHKLLRETD 1442

  Fly  5584 TLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLE------------------TTVPSVTS 5630
            .           ..|.|...|||.......|...|...:                  ..||:::.
  Rat  1443 I-----------HVTAEPGLDVPEGTALNLSCHLPGGSQPVGNSSFTWFWNRHLLHSAPVPTLSF 1496

  Fly  5631 ETTTNVPIGSTGGQV---TGQTTAPPSEVRTTIRVEESTLPSRSTDRTTPSESPETPTIL----- 5687
            ........||...:.   ||.||:||..:|...                   .|:|||:.     
  Rat  1497 TPVVRAQAGSYHCRAELSTGVTTSPPVMLRVLY-------------------PPKTPTLTVFVEP 1542

  Fly  5688 ---------------PSDSTTRTYSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTN 5737
                           |..|.|.....|.      |.:.:|.  |.|:...:..|.|...|    .
  Rat  1543 QGGHQGILDCRVDSEPLASLTLQLGSQL------VASNQPH--SAPTQPHIRVTAPPNAL----R 1595

  Fly  5738 VPIGSTGGQVTGQTTATPS 5756
            :.|...|....|:...|.|
  Rat  1596 LDIEELGPNNQGEYVCTAS 1614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572 14/54 (26%)
DUF4696 4127..4678 CDD:292395 119/548 (22%)
DUF4758 4275..4448 CDD:292572 43/214 (20%)
DUF4758 4377..4574 CDD:292572 53/245 (22%)
DUF4758 4581..4754 CDD:292572 41/216 (19%)
DUF4758 4683..4847 CDD:292572 32/181 (18%)
DUF4758 4785..4964 CDD:292572 33/190 (17%)
DUF4696 4841..5385 CDD:292395 111/603 (18%)
DUF4758 4887..5098 CDD:292572 37/226 (16%)
DUF4758 5193..5371 CDD:292572 41/201 (20%)
DUF4758 5294..5487 CDD:292572 50/225 (22%)
DUF4758 5445..5650 CDD:292572 42/235 (18%)
DUF4758 5700..5877 CDD:292572 12/57 (21%)
DUF4696 5756..6396 CDD:292395 1/1 (100%)
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Siglec1XP_017447235.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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