DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Nid2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001012005.2 Gene:Nid2 / 302248 RGDID:1311685 Length:1396 Species:Rattus norvegicus


Alignment Length:722 Identity:169/722 - (23%)
Similarity:225/722 - (31%) Gaps:254/722 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 YGGCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVEN 184
            |.|.|   ::..|.....|...|.||:....|.|.|...:.|||.||  :.|.....:..:...:
  Rat   496 YNGAN---RETCEHSHGQCSRHAFCTDYTTGFCCHCQSRFYGNGRHC--VPEGAPHRVNGKVSGH 555

  Fly   185 AECCNLPAHF-------LCKCKDG----------------------------------------- 201
            .:..::|.||       .....||                                         
  Rat   556 LQVGHMPVHFTDVDLHAYIVSNDGRAYTAISQIPQPAAQALLPVLPIGGLFGWLFALEKPGSENG 620

  Fly   202 ----------------YEGDGEVLCTDVDECRNPENCGPNALCTNT---------PGNYTCSCPD 241
                            :.|:..|..|...|..:||    |.|..||         |.|:|.... 
  Rat   621 FSLTGATFVHDVEVTFHPGEERVRITQTAEGLDPE----NYLSLNTNIEGQVPFIPANFTAHIA- 680

  Fly   242 GYVGNNPYREGCQDVDEC-------SYPNVCGPGAICTNLEGSYRCDCPPGYDGDGRS------- 292
                  ||:|.....|..       |:..:.|    ..|...|||.|....|.....:       
  Rat   681 ------PYQEFYHHRDSVVTSSSSRSFSLISG----SINQTRSYRIDQNITYKACSHAPRHLAVP 735

  Fly   293 ----------------ESGC-------------VDQDECARTPCGRNADCLNTDG--------SF 320
                            |.|.             ||....|..||...:...:|..        .:
  Rat   736 ATQQLTVDRAFALYSEEEGVLRFAVTNQIGPVEVDSAPTAVNPCYDGSHTCDTTARCHPGTGVDY 800

  Fly   321 RCLCPDGYSGDPMNGCEDVDECATN-NPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPL 384
            .|.|..|:.||. ..|.||:||||. :.||..:.||||.||::|.|.||:....|.|...|    
  Rat   801 TCECTPGFQGDG-RSCVDVNECATGFHRCGPNSVCVNLVGSYRCECRSGYEFADDRHTCVL---- 860

  Fly   385 NTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPG-SYRCLCPSGFQ 448
                         |||...      .|||......|:|      .|:||:..| |:.|.|..||.
  Rat   861 -------------IAPPPN------PCLDGSHTCAPEG------QARCIHHGGSSFSCACLPGFV 900

  Fly   449 GQGYLHCENINECQDNPCGENAICTDTVGSFVCTCKPDYTGDPFRGCVDI---DECTALDKPC-- 508
            |.|: .|.:::||.:|.|...|||.:|.|||.|.|:|.|.||.|....|.   |..:.| |||  
  Rat   901 GTGH-QCSDVDECAENRCHGAAICYNTPGSFSCRCQPGYHGDGFHCASDTVPEDSISGL-KPCEY 963

  Fly   509 -GQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFE 572
             .::|..::...|.....||                          |.:....:..||....|| 
  Rat   964 QQRYAQAQHAHAGSRIHIPQ--------------------------CDDQGNFVPLQCHGSTGF- 1001

  Fly   573 PIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSP------PRMACKQPCEDVRCG 631
               ..|||    :...||.|..    ..|||....|     |.|      ||..|::..|.:.  
  Rat  1002 ---CWCVD----QNGHEVPGTQ----TPPGSTPPHC-----GPPPEPTQRPRTVCERWRESLL-- 1048

  Fly   632 AHAYCKPDQNEAYCVCEDGWTYNP------SDVAAGCVDIDECDVMHGPFGSCGQNATCTNSAGG 690
            .|....|..::....|:|...:.|      ||. ..|||.|            |:....|.|..|
  Rat  1049 EHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDF-CWCVDKD------------GRELPGTRSQPG 1100

  Fly   691 FTCACPP 697
            ...||.|
  Rat  1101 TMPACIP 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 10/28 (36%)
EGF_CA 212..247 CDD:238011 10/43 (23%)
EGF_CA 255..>286 CDD:214542 8/37 (22%)
EGF_CA 298..331 CDD:238011 8/40 (20%)
EGF_CA 338..373 CDD:238011 18/35 (51%)
EGF_CA 413..456 CDD:238011 14/43 (33%)
EGF_CA 457..490 CDD:238011 15/32 (47%)
EGF_CA 497..>529 CDD:214542 10/37 (27%)
EGF_CA 580..>612 CDD:214542 8/31 (26%)
EGF_3 676..702 CDD:289699 7/22 (32%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Nid2NP_001012005.2 NIDO 108..274 CDD:214712
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..452
EGF_3 504..539 CDD:289699 11/34 (32%)
nidG2 543..767 CDD:238158 32/238 (13%)
EGF_3 779..815 CDD:289699 7/36 (19%)
EGF_CA 817..858 CDD:284955 20/40 (50%)
EGF_3 868..906 CDD:289699 16/44 (36%)
EGF_CA 908..945 CDD:214542 18/36 (50%)
TY 960..1021 CDD:238114 18/98 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1013..1036 7/31 (23%)
TY 1040..1105 CDD:238114 17/79 (22%)
LY 1155..1193 CDD:214531
LDL-receptor class B 1 1175..1218
LY 1199..1241 CDD:214531
LDL-receptor class B 2 1219..1261
LY 1242..1286 CDD:214531
LDL-receptor class B 3 1262..1306
LY 1287..1329 CDD:214531
LDL-receptor class B 4 1307..1348
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11205
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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