DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Scube3

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_008771027.1 Gene:Scube3 / 294297 RGDID:1304880 Length:1015 Species:Rattus norvegicus


Alignment Length:1449 Identity:288/1449 - (19%)
Similarity:409/1449 - (28%) Gaps:706/1449 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 DQDECAR--TPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCEDVDECATNNPCGLGAECVNLGGS 360
            |.|||..  ..|..:|.|.||..|::|:|..||:||..: |:|||||...:..|...:|||:.|:
  Rat    34 DVDECVEGTDHCHIDAICQNTPRSYKCICKSGYTGDGKH-CKDVDECEREDNAGCVHDCVNIPGN 97

  Fly   361 FQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAK 425
            ::|.|..||.|.||.|                                 .|||:|||.:.:|   
  Rat    98 YRCTCYDGFHLAHDGH---------------------------------NCLDVDECAEGNG--- 126

  Fly   426 CGTNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDNPCGENAICTDTVGSFVCTCKPDYTGD 490
             |....|:|..|||.|.|..||    :|        .||             ...|..:|:    
  Rat   127 -GCQQSCVNMMGSYECHCRDGF----FL--------SDN-------------QHTCIQRPE---- 161

  Fly   491 PFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCT 555
                    :....::|..|...:|..|        |:|       .:|||       |...|:.|
  Rat   162 --------EGMNCMNKNHGCAHICRET--------PKG-------GIACE-------CRPGFELT 196

  Fly   556 NNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMA 620
            .|..                       :|:                    ..|..|..|      
  Rat   197 KNQR-----------------------DCK--------------------LTCNYGNGG------ 212

  Fly   621 CKQPCEDV----RCGAHAYCKPDQNEAYCVCEDGWT---------YNPSDVAAGCVDIDECDVMH 672
            |:..|:|.    |||.|.        .:.:..||.|         :.|:.    .|..:.|.|.:
  Rat   213 CQHTCDDTEQGPRCGCHV--------KFVLHTDGKTCIGERRLEQHGPTQ----AVSNETCAVNN 265

  Fly   673 GPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSK-CVDVDECRTGASKCGAGAECVNVPGGGYTC 736
            |     |.::.|.::|.|..|:||.||...|..| |.|:||||                      
  Rat   266 G-----GCDSKCHDAATGVHCSCPVGFMLQPDRKTCKDIDECR---------------------- 303

  Fly   737 RCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQ 801
                                                                             
  Rat   304 ----------------------------------------------------------------- 303

  Fly   802 CMLANGQAQCLCAPGYTGNSALAGGCNDIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDPYRE 866
              |.|                  |||:.             ||.||.|.:.|.            
  Rat   304 --LHN------------------GGCDH-------------ICRNTVGSFECS------------ 323

  Fly   867 GCITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGL 931
                                              |::||:.......|||:||||..|   .|  
  Rat   324 ----------------------------------CKKGYKLLINERSCQDIDECSFDR---TC-- 349

  Fly   932 NALCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCSSGQACPSGAEC 996
            :.:|.|.|||::|.|.:|:                                              
  Rat   350 DHMCVNTPGSFQCLCHRGY---------------------------------------------- 368

  Fly   997 ISIAGGVSYCACPKGYQTQPDGSCVDVDECE-ERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAY 1060
              :..|:|:|.              |||||. .:|.  |.||  |:|.||||.|.||.|.....:
  Rat   369 --LLYGISHCG--------------DVDECSINKGG--CRFG--CINTPGSYQCTCPAGQGRLHW 413

  Fly  1061 NGLCALAQRKCAADRECAANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAKCTPSDP 1125
            ||            ::|                                             ::|
  Rat   414 NG------------KDC---------------------------------------------TEP 421

  Fly  1126 PQCMCEAGFKGDPLLGCT---DEDECSHLPCAYGA-YCVNKKGGYQCVCPKDYTGDPYKSGCIFE 1186
            .:|...:| ....:|.|:   .:|.|: |.|...| :....:.|:...|                
  Rat   422 VKCQSSSG-ASKAMLSCSRSGKKDTCA-LTCPSRARFLPESENGFTVSC---------------- 468

  Fly  1187 SGTPKSKCLSNDDCASNLACLEGSCVSPCSSLL---CGSNAYCETEQHAGW----CRCRVGYVKN 1244
             |||..|..:            |..:.|.:|.:   |...|....:|.|.:    .:||:.....
  Rat   469 -GTPSPKAAA------------GRAIHPGNSTISNSCHEAAVLPVKQRASFKIKDAKCRLHLRNK 520

  Fly  1245 GDGDCVSQCQDVICGDGALCIPTSEGPTCKCPQGQLGNPFPGG-SCSTDQ-------CSAAR--- 1298
            |..:                  .:.|.|          |.||| |||..|       |.::|   
  Rat   521 GKAE------------------EASGRT----------PGPGGASCSDCQVTFIHLKCDSSRKGK 557

  Fly  1299 ------PCGER--QICINGRCKERCEGVVCGIGATCDRNN------------GKCICEPNFV--- 1340
                  |.|:.  ::.:....:.|.|....|.|.||.|..            .|.|.:..|:   
  Rat   558 GRRARTPPGKEVTRLTLELEAEVRAEETTAGCGLTCLRQRMERRLKGSLKMLRKSINQDRFLLRL 622

  Fly  1341 --------GNPDLICMPPIEQAK-CSPGCGENAHCEYGLGQSRCACNPGTFGNPYEGCGAQSKNV 1396
                    ..|.|......|..: |.||       ::..|....:|..||:   |.|...|    
  Rat   623 AGLDYELAHKPGLAAGDRAELVEVCRPG-------QHRAGTKCVSCPQGTY---YHGQTEQ---- 673

  Fly  1397 CQPNSCGPNAECRAVGNHISC-LCPQGFSGNPYIGCQDVDECANKPCGLNAACLNRAGGFECLCL 1460
            |.|...|...|..   ..:|| |||...:..| :|..:|..||.:                  |.
  Rat   674 CVPCPAGTFQERE---GQLSCDLCPGSDAHGP-LGATNVTTCAGQ------------------CP 716

  Fly  1461 SG-HAGNPYSSCQPIESKFCQDANKCQCNERVECPEG-YSCQKGQCKNLCSQASCGPRAICDAGN 1523
            .| |:|:.:..|||                   ||.| |..:.|  :.||  ..||         
  Rat   717 PGQHSGDGFKPCQP-------------------CPRGTYQPEAG--RTLC--FPCG--------- 749

  Fly  1524 CICPMGYIGDPHDQVHGCSIRGQCGNDADCLHSEICFQLGKGLRKCVDACSKIQCGPNALCVSED 1588
                 |.:...|:                   ..:.||         |..:|:||.|.....:..
  Rat   750 -----GGLTTKHE-------------------GAVSFQ---------DCDTKVQCSPGHYYNTSI 781

  Fly  1589 HRSSCI-CSDGFFGNPSNLQVGCQ--PERTVPEEED-----KCKSDQDCSRGYGCQASVNGIKEC 1645
            ||  || |:.|.: .|...|..|.  |..|..:.:.     :||:.| |....|   ...|..|.
  Rat   782 HR--CIRCAVGSY-QPDFRQNFCTRCPGNTSTDFDGSTSVAQCKNRQ-CGGELG---EFTGYIES 839

  Fly  1646 INLCSNVVCGPNELCKINP 1664
            .|...|...|...:..|||
  Rat   840 PNYPGNYPAGVECIWNINP 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011 14/34 (41%)
EGF_CA 338..373 CDD:238011 15/34 (44%)
EGF_CA 413..456 CDD:238011 16/42 (38%)
EGF_CA 457..490 CDD:238011 4/32 (13%)
EGF_CA 497..>529 CDD:214542 5/31 (16%)
EGF_CA 580..>612 CDD:214542 2/31 (6%)
EGF_3 676..702 CDD:289699 9/25 (36%)
EGF_CA 1022..1056 CDD:214542 19/34 (56%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Scube3XP_008771027.1 EGF_3 38..73 CDD:289699 13/35 (37%)
FXa_inhibition 81..115 CDD:291342 13/66 (20%)
FXa_inhibition 121..156 CDD:291342 15/63 (24%)
FXa_inhibition 166..202 CDD:291342 13/80 (16%)
FXa_inhibition 206..241 CDD:291342 12/48 (25%)
FXa_inhibition 261..296 CDD:291342 14/39 (36%)
FXa_inhibition 302..337 CDD:291342 16/200 (8%)
vWFA <334..370 CDD:294047 17/88 (19%)
EGF_CA 378..419 CDD:214542 22/101 (22%)
GCC2_GCC3 664..711 CDD:285001 17/57 (30%)
GCC2_GCC3 718..765 CDD:285001 19/111 (17%)
GCC2_GCC3 774..821 CDD:285001 11/49 (22%)
CUB 826..937 CDD:238001 10/36 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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