DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Jag2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_038967750.1 Gene:Jag2 / 29147 RGDID:2938 Length:1247 Species:Rattus norvegicus


Alignment Length:1114 Identity:281/1114 - (25%)
Similarity:388/1114 - (34%) Gaps:384/1114 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FRGEVFYLNL------ENGYFGCQVNESTEYLQLFNLSKLCD--GTQDCFLGADELSKELKCTND 96
            |.|.|.:|.|      :..|:....|:.......|.....||  |.:.|..|  .:.||  |...
  Rat   183 FSGHVAHLELQIRVRCDENYYSATCNKFCRPRNDFFGHYTCDQYGNKACMDG--WMGKE--CKEA 243

  Fly    97 CDKDGTKCTHGAC-LNGVCHCNDGYGGCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYR 160
            ..|.|....||.| :.|.|.|:.|:.|..|   ||                      |..:||  
  Rat   244 VCKQGCNLLHGGCTVPGECRCSYGWQGKFC---DE----------------------CVPYPG-- 281

  Fly   161 GNGFHCEDIDECQDPAIAARCVENAECCNLPAHFLCKCKDGYEGDGEVLC-TDVDECRNPENCGP 224
                           .:...|||       |.|  |.|:..:   |.:|| .|::.|.:...|..
  Rat   282 ---------------CVHGSCVE-------PWH--CDCETNW---GGLLCDKDLNYCGSHHPCVN 319

  Fly   225 NALCTNT-PGNYTCSCPDGYVGNNPYREGCQDVDECSYPNVCGPGAICTNLEGSYRCDCPPGYDG 288
            ...|.|. |..|.|:|||||:|.|     |:..:.....|.|..|..|..:...:.|.||.|:.|
  Rat   320 GGTCINAEPDQYLCACPDGYLGKN-----CERAEHACASNPCANGGSCHEVLSGFECHCPSGWSG 379

  Fly   289 DGRSESGCVDQDECARTPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCE-DVDECATNNPCGLGA 352
                .:..:|.||||..||.....|::....|.|:||:.:.|..   |: |.:|| ...||....
  Rat   380 ----PTCALDIDECASNPCAAGGTCVDQVDGFECICPEQWVGAT---CQLDANEC-EGKPCLNAF 436

  Fly   353 ECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLAC-LDIDE 416
            .|.||.|.:.|.|..|:                                     .|..| ::|::
  Rat   437 SCKNLIGGYYCDCLPGW-------------------------------------KGANCHININD 464

  Fly   417 CNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYLHCE-NINECQDNPCGENAICTDTVGSFV 480
            |:     .:|.....|.:....|:|:||.||.|:   ||| ...:|..:||....||.|.|..|.
  Rat   465 CH-----GQCQHGGTCKDLVNGYQCVCPRGFGGR---HCELEYYKCASSPCRRGGICEDLVDGFR 521

  Fly   481 CTCKPDYTGDPFRGC-VDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDV 544
            |.|....:| |.  | ||:|.|.  ..||...|.|.|....|.|.||:.:.||            
  Rat   522 CHCPRGLSG-PL--CEVDVDLCE--PNPCLNGARCYNLEDDYYCACPEDFGGK------------ 569

  Fly   545 NILCSSNFDCTNNAE-CIENQCFCLD--GFEPIGSSCVDIDECRTH----AEVCGPHAQCLNTP- 601
                    :|:...| |....|..:|  ||| .||        |.|    :.|||||..|::.| 
  Rat   570 --------NCSVPRETCPGGACRVIDGCGFE-AGS--------RAHGAAPSGVCGPHGHCVSLPG 617

  Fly   602 GSYGCECEAGYVGSPPRMACK--------QPC----------EDVRCGAHA------------YC 636
            |::.|.|::|:.|:    .|.        |||          :..||...:            .|
  Rat   618 GNFSCICDSGFTGT----YCHENIDDCMGQPCRNGGTCIDEVDSFRCFCPSGWEGELCDINPNDC 678

  Fly   637 KPDQ-----------NEAYCVCEDGW---TYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNS 687
            .||.           |:.||||:|||   |.:..:.        :||..     :|....||.:|
  Rat   679 LPDPCHSRGRCYDLVNDFYCVCDDGWKGKTCHSREF--------QCDAY-----TCSNGGTCYDS 730

  Fly   688 AGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRC 752
            ...|.||||||:.|.                                ||....|:...|:|   |
  Rat   731 GDTFRCACPPGWKGS--------------------------------TCTIAKNSSCVPNP---C 760

  Fly   753 VPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRH---PCEALNCGAHAQCMLANGQAQCLCA 814
            |...:|..:.|         :..|:|.:...|..|.|   .|..|.|.....|:......:|.||
  Rat   761 VNGGTCVGSGD---------SFSCICRDGWEGRTCTHNTNDCNPLPCYNGGICVDGVNWFRCECA 816

  Fly   815 PGYTGNSALAGGCN-DIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGCITSKTVGCSD 878
            ||:.|..     |. :||||:::|||..|.|.:...||.|.||.|.||...:|..|.::      
  Rat   817 PGFAGPD-----CRINIDECQSSPCAYGATCVDEINGYRCSCPPGRSGPRCQEVVIFTR------ 870

  Fly   879 ANPCAT-------GETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLN-ALC 935
              ||.:       |.:.|:|.   || |.|..|:.            :||    |..||.. .|.
  Rat   871 --PCWSRGVSFPHGSSWVEDC---NS-CRCLDGHR------------DCS----KVWCGWKPCLL 913

  Fly   936 KNLPGSYECRCPQGHNGNPFIM-------CEICNTPECQCQSPY----------KLVGNSC---- 979
            ...|.:...:||.|.......|       ||  |..||..:.|.          ..:.|:|    
  Rat   914 SPQPSALSAQCPPGQQCREKAMGQCLQPPCE--NWGECTAEDPLPPSTPCLPRTTHLDNNCARLT 976

  Fly   980 -------VLSG------CSSGQACP-------------------SGAECISIAGGVSYCACPKGY 1012
                   |..|      ||..:|.|                   |||..:.:|  ||:...    
  Rat   977 LHFNRDQVPQGTTVGAICSGIRALPATRAAARDRLLLLLCDRASSGASAVEVA--VSFSPA---- 1035

  Fly  1013 QTQPDGSCV 1021
            :..||.|.:
  Rat  1036 RDLPDSSLI 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 3/28 (11%)
EGF_CA 212..247 CDD:238011 14/35 (40%)
EGF_CA 255..>286 CDD:214542 7/30 (23%)
EGF_CA 298..331 CDD:238011 12/32 (38%)
EGF_CA 338..373 CDD:238011 12/34 (35%)
EGF_CA 413..456 CDD:238011 12/42 (29%)
EGF_CA 457..490 CDD:238011 10/32 (31%)
EGF_CA 497..>529 CDD:214542 12/31 (39%)
EGF_CA 580..>612 CDD:214542 12/36 (33%)
EGF_3 676..702 CDD:289699 11/25 (44%)
EGF_CA 1022..1056 CDD:214542 281/1114 (25%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Jag2XP_038967750.1 MNNL 28..103 CDD:400141
DSL 178..240 CDD:396134 15/60 (25%)
EGF_CA 307..345 CDD:238011 15/42 (36%)
EGF 351..381 CDD:394967 9/33 (27%)
EGF_CA 385..421 CDD:238011 13/38 (34%)
EGF_CA 423..458 CDD:238011 13/72 (18%)
EGF_CA 461..496 CDD:238011 12/42 (29%)
EGF_CA 502..534 CDD:238011 12/34 (35%)
EGF_CA 536..571 CDD:238011 14/56 (25%)
EGF_CA 636..671 CDD:238011 5/34 (15%)
EGF_CA 676..709 CDD:238011 11/32 (34%)
EGF 716..746 CDD:394967 14/66 (21%)
EGF_CA 757..787 CDD:238011 9/41 (22%)
EGF_CA <797..824 CDD:238011 8/31 (26%)
EGF_CA 827..863 CDD:238011 17/35 (49%)
VWC_out 872..943 CDD:214565 20/90 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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