DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Zfp236

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_006255073.1 Gene:Zfp236 / 291409 RGDID:1309670 Length:1848 Species:Rattus norvegicus


Alignment Length:2019 Identity:358/2019 - (17%)
Similarity:602/2019 - (29%) Gaps:666/2019 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  3666 CSCPSCHIGRPEIECKSDPKCVAEDTDPKTKEQ--IPCSTDSECPETLQCGQYGQCTDPCNNPLF 3728
            |..|:.|  :.||...|.||........:..||  .|...| :||:|                 |
  Rat    33 CPIPNFH--KCEICLLSFPKESQFQRHMREHEQNDKPHRCD-QCPQT-----------------F 77

  Fly  3729 ICESN---KKCETRRHQPVC-ICKSGFIVNEYGELTC---APDKRECYRDDDCASNMACSDGKCR 3786
            ..|.|   .||......||| :|...|  :....|..   ..:|.|         |:.||:  |.
  Rat    78 NVEFNLTLHKCTHNAEDPVCPVCNKKF--SRVASLKAHIMLHEKEE---------NLICSE--CG 129

  Fly  3787 NPCIVPLGRAAICAENKSCEVQNHKPVCICMRDCQPSISICLRDAGCPASQACRKLKCVDPCEFA 3851
            :...:. .:.||..|....|:.|::            :..|         :||:|       ||.
  Rat   130 DEFTLH-SQLAIHMEEHRQELANNR------------VHTC---------KACKK-------EFE 165

  Fly  3852 TCAPNSPCIVEDHKPICKFCPAGFIADAKNGCQKAKPGGNCTSNTDCSQAHQ------------- 3903
            |    ||.:.|..|..||...:|..:..:|    ....|...|...|.:..|             
  Rat   166 T----SPELKEHMKTHCKVRASGTRSYNRN----IDRSGFTYSCPHCGKTFQKPSQLTRHIRIHT 222

  Fly  3904 ------CGSSGKCIDPCLTSCAGGVKCVVSAHRVT-------ICT-CPATLT--NNTDSNCTSTD 3952
                  |...||..:.         |..:..|.:.       .|. |||..:  .|..|:     
  Rat   223 GERPFKCSECGKAFNQ---------KGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSH----- 273

  Fly  3953 ITVGTTTQRIETTTDFINVKYTVMQLANQTEMRTRFTDIEAENETTGPYTTTTESYKTTKQLSSN 4017
                  .||:.:                           |.:|   ||....||.....|.|.|.
  Rat   274 ------VQRVHS---------------------------EVKN---GPTYNCTECSCVFKSLGSL 302

  Fly  4018 PETETPTTLPSRPTTRPFTDQTTEFTSEIPTITPMEGSTPTPSHLETTVASITSESTTREVYTI- 4081
            ....:...:...|.....|:.....|:.|....|::       .:|..|:|::.|..::.|..: 
  Rat   303 NTHISKMHMGGPPNPSSSTETAHVITATIFQTLPLQ-------QVEAQVSSVSGEQNSQAVTDVI 360

  Fly  4082 -KPFDRSTPTPVSPDTTVPSITFETTTNIPIGTTRGQVTEQTTSSPSEKRTTIRVEE-------- 4137
             :..:.|.|.||.                         .:|:..|..:...|:.:.:        
  Rat   361 QQLLELSEPGPVE-------------------------AQQSPQSGRQLSVTVGINQDILQQALE 400

  Fly  4138 ----STLP--------SRSTDRTTPSESPETPTILPSDSTTRTYSDQTTESTRDVPTTRPFEAST 4190
                |:||        |.:...|..|:||.|.::....:.               |.....|...
  Rat   401 NSGLSSLPVAAPPSDCSHAQTSTVSSQSPHTSSVSAEQAD---------------PMDAEQEKGQ 450

  Fly  4191 PSPASLETTVPSVTLETTTNDPIGSTGGQVTEQTTSSPSEVRTTIGLEESTLPSRSTDRTTPSE- 4254
            .||...|.....:                :.:::...|..:|...|:.....|..:.:...||: 
  Rat   451 ESPEKAEKKEKKI----------------LKKKSPFLPGSIREENGVRWHVCPYCTKEFRKPSDL 499

  Fly  4255 -------SPETPTTLPSDFITRPHSDQTTESTRDVPTTRPFEA--------STPSSASLETTVPS 4304
                   :.|.|...|..|  |..:.::| .|..:.|....:|        |..:|.||:     
  Rat   500 VRHIRIHTHEKPFKCPQCF--RAFAVKST-LTAHIKTHTGIKAFKCQYCMKSFSTSGSLK----- 556

  Fly  4305 VTLETTTNV-PIG--------STGGQVTEQTTS--SPSEVRTTIRVEESTLPSRSADRTTPSESP 4358
            |.:...|.| |..        .|.|.......|  ..:|:| .:|.:...:..|:...:.|  .|
  Rat   557 VHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELR-KMRQQRKPVKGRAGKSSAP--VP 618

  Fly  4359 ETPTTLPSDFT--------------------------TRPH-----------SEQTTESTRDVPT 4386
            :.|...|...|                          .||:           |....:..|....
  Rat   619 DIPLQEPILITDLGLIQPIPKNQFFQNYFNNNFGNEADRPYKCFYCHRAYKKSCHLKQHIRSHTG 683

  Fly  4387 TRPFEASTPSPASLETTVPSVTLETTTNVP----IGSTGGQVTGQTTSSPSEVRTTIRVEESTLP 4447
            .:||:.|......:...|....:.|.|.:.    :...|...||.:......:...:|       
  Rat   684 EKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLR------- 741

  Fly  4448 SRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDVPTTRPFEAS-------TPSSASLETT 4505
                    |...|....|..:....:.|.:           |..:|.:       ..||...|:|
  Rat   742 --------PYMCPYCQKTFKTSLNCKKHMK-----------THRYELAQQLQQHQEASSMDEEST 787

  Fly  4506 VPSVTLETTTNVP--IGSTGGQVTEQTTSSPSE------VRTTIRVEESTLPSRSADRTTLSESP 4562
            |...:::.:..:|  |.|...|.|.:|.::..|      .:..:..|::.|..:.||:..  |:.
  Rat   788 VDQQSIQVSAPMPVEIESAELQQTPETVAADPESILELGPQHVVGTEDTALGQQLADQPL--EAD 850

  Fly  4563 ETPTTLPSDFTIRPHSEQTTESTRDVPTTRPFEASTPSPASLET-------TVPSVTSETTTNVP 4620
            :......|...:..|.:|..|.            .||.| |.|:       ||....|:.|:..|
  Rat   851 DEDGFAASQAPLPGHMDQFEEQ------------GTPQP-SFESAGLPQGFTVTDTYSQQTSFPP 902

  Fly  4621 IGSTGGQVTGQTTAPPSEFRTTIRVEESTLPSRSTD------RTTPSESPE-------TPTIL-- 4670
            :.......|.::.|..:.|.     :::.|...|:|      |..|..|.|       .|..|  
  Rat   903 VQQLQDSSTLESQALSTSFH-----QQNLLQVPSSDAINVATRLLPESSQEDLDLQTHRPQFLGD 962

  Fly  4671 PSDSTTRTY-----------SDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIG 4724
            ..|.:.|:|           |....:..|.....:|::........:.:.|.....:|.|.|...
  Rat   963 SEDQSRRSYRCDYCHKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAF 1027

  Fly  4725 S---------TGGQVTEQTTSSPS-----------EVRTTI----RVEESTLPSRSADRTTPSES 4765
            |         |.|.:|....:..|           ..||.|    .::.....|..|.....:|.
  Rat  1028 SCSVCSASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTAIHCRKHMKRHQAVSSVASAVAETEG 1092

  Fly  4766 PETPTTLPSDFITRPHSEK--------TTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTN 4822
            .:|......:...|..|.|        |.|.|..:...:|.|::|.|.                 
  Rat  1093 GDTCVEEDEENSDRSASRKPRPEVITFTEEETAQLAKIQPQESATVSE----------------- 1140

  Fly  4823 VPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKT 4887
                    :|..|:.:....:        |.:..:.|:.....:.....|..|..|      :|.
  Rat  1141 --------KVLVQSAAEKDRI--------SEMKDKQAELEAEPKHANCCTYCPKSF------KKP 1183

  Fly  4888 TESTRDV---PTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQ------VTEQTTSSPS 4943
            ::..|.|   ...:|::.        :....|.|:::|.:..:.:..||      |.....|:..
  Rat  1184 SDLVRHVRIHTGEKPYKC--------DECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKG 1240

  Fly  4944 EVRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSDFTTRPHSEQTTESTRDVPT-------TRP 5001
            .::..:|:.....|.:.                       ||.|....::....|       :.|
  Rat  1241 SLKVHMRLHTGAKPFKC-----------------------PHCELRFRTSGRRKTHMQFHYKSDP 1282

  Fly  5002 FEASTPSPASLETTVPSVTL----ETTTNVPIGSTG---GQVTEQTTSSPSEVRTTIRVEESTLP 5059
            .:|..|...|....:.||.|    .|..||.|.:..   ||. :|....|.      .|.::.||
  Rat  1283 KKARKPVTRSSSENLQSVNLLNSSATDPNVFIMNNSVLTGQF-DQNMLQPG------LVGQAILP 1340

  Fly  5060 ---SRSADRTTPSESPETPTTLPSDFITRTYSDQTTESTRDVPTTRPFEASTPSPASLETTVPSV 5121
               |...|                  :|.:.:|.:..:...:..  ...|:...|   ...:..:
  Rat  1341 ASVSAGGD------------------LTVSLTDGSLATLEGIQL--QLAANLVGP---NVQISGI 1382

  Fly  5122 TSETTTNVPIGSTGGQVTGQTTAPPSEFRTTIRVEESTLPSRSTDRTTPSESPET---------- 5176
            .:.:..|:.: .....:..||....|.....|..|.||....|:.:|:.|..|.:          
  Rat  1383 DASSINNITL-QIDPSILQQTLQQSSLLAQPITGESSTASQNSSLQTSDSTVPASVVIQPISGLS 1446

  Fly  5177 --PTTLPSDFTTRPHSDQ----TTES--TRDVP---TTRPFEASTPSPASLETTVPSVTLETTTN 5230
              ||...::.|..|.|:|    ||.:  |:|:|   |::...:::..|..:..|:.:.:|...  
  Rat  1447 LQPTVTSANLTIGPLSEQDSVLTTSNTGTQDLPQVMTSQGLVSTSTGPHEITLTINNSSLSQV-- 1509

  Fly  5231 VPIGSTGGQVTEQTTSSPSEVRTTIRVEESTL-PSRSADRTTPSESPETPTLPSDFTTRPHSEQT 5294
              :....|.....::.||.|:..||    |.| ||..   :.||.:|.:|:..|       ::..
  Rat  1510 --LAQAAGPTASSSSGSPQEITLTI----SELNPSNG---SLPSTAPMSPSAIS-------AQNL 1558

  Fly  5295 TESTRDVPATRPFEASTP---------SPASLETTVPSVTSEA------TTNVPIGSTGGQVTEQ 5344
            ..|:..|.|    :||..         .|..|:|...::||:.      .|:..:...||     
  Rat  1559 VMSSSGVGA----DASVTLTLADTQGMLPGGLDTVTLNITSQGQQFPALLTDPSLSGQGG----- 1614

  Fly  5345 TTSSPSEVRTTIRVEESTLPSRS---------TD---RTSPSESPETPTTLPSDFTTRPHSDQTT 5397
             ..||.    .|.|..:..||.:         ||   :.||:..||....|          .|..
  Rat  1615 -AGSPQ----VILVSHTPQPSSAAGEEIAYQVTDVSAQLSPNSQPEKEGPL----------HQCL 1664

  Fly  5398 ECTR 5401
            :|.|
  Rat  1665 DCDR 1668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572 33/221 (15%)
DUF4696 4127..4678 CDD:292395 114/675 (17%)
DUF4758 4275..4448 CDD:292572 38/232 (16%)
DUF4758 4377..4574 CDD:292572 35/215 (16%)
DUF4758 4581..4754 CDD:292572 41/229 (18%)
DUF4758 4683..4847 CDD:292572 30/195 (15%)
DUF4758 4785..4964 CDD:292572 27/187 (14%)
DUF4696 4841..5385 CDD:292395 114/618 (18%)
DUF4758 4887..5098 CDD:292572 38/236 (16%)
DUF4758 5193..5371 CDD:292572 45/210 (21%)
DUF4758 5294..5487 CDD:292572 29/135 (21%)
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Zfp236XP_006255073.1 C2H2 Zn finger 41..61 CDD:275368 5/19 (26%)
COG5048 <52..234 CDD:227381 49/249 (20%)
C2H2 Zn finger 70..90 CDD:275368 9/37 (24%)
C2H2 Zn finger 97..117 CDD:275368 4/21 (19%)
C2H2 Zn finger 125..145 CDD:275368 6/22 (27%)
C2H2 Zn finger 157..177 CDD:275368 11/39 (28%)
COG5048 197..>550 CDD:227381 72/468 (15%)
zf-C2H2 199..221 CDD:278523 3/21 (14%)
C2H2 Zn finger 201..221 CDD:275368 2/19 (11%)
zf-H2C2_2 214..238 CDD:290200 3/23 (13%)
C2H2 Zn finger 229..249 CDD:275368 5/28 (18%)
zf-H2C2_2 241..266 CDD:290200 5/24 (21%)
C2H2 Zn finger 257..278 CDD:275368 8/31 (26%)
C2H2 Zn finger 289..310 CDD:275368 5/20 (25%)
zf-C2H2 484..506 CDD:278523 3/21 (14%)
C2H2 Zn finger 486..506 CDD:275368 3/19 (16%)
zf-H2C2_2 498..522 CDD:290200 5/25 (20%)
C2H2 Zn finger 514..534 CDD:275368 5/22 (23%)
zf-H2C2_2 527..551 CDD:290200 4/23 (17%)
C2H2 Zn finger 542..562 CDD:275368 5/24 (21%)
zf-H2C2_2 554..579 CDD:290200 6/29 (21%)
C2H2 Zn finger 570..590 CDD:275368 2/19 (11%)
COG5048 654..1059 CDD:227381 78/450 (17%)
C2H2 Zn finger 661..681 CDD:275368 2/19 (11%)
zf-H2C2_2 673..698 CDD:290200 4/24 (17%)
C2H2 Zn finger 689..709 CDD:275368 2/19 (11%)
C2H2 Zn finger 717..737 CDD:275368 3/19 (16%)
zf-H2C2_2 729..754 CDD:290200 4/39 (10%)
C2H2 Zn finger 745..765 CDD:275368 3/30 (10%)
COG5048 963..1306 CDD:227381 63/412 (15%)
zf-C2H2 971..993 CDD:278523 3/21 (14%)
C2H2 Zn finger 973..993 CDD:275368 2/19 (11%)
zf-H2C2_2 985..1010 CDD:290200 2/24 (8%)
C2H2 Zn finger 1001..1021 CDD:275368 1/19 (5%)
zf-H2C2_2 1014..1038 CDD:290200 4/23 (17%)
C2H2 Zn finger 1029..1049 CDD:275368 3/19 (16%)
zf-H2C2_2 1041..1066 CDD:290200 2/24 (8%)
C2H2 Zn finger 1173..1193 CDD:275368 6/25 (24%)
zf-H2C2_2 1185..1209 CDD:290200 4/31 (13%)
C2H2 Zn finger 1201..1221 CDD:275368 3/27 (11%)
C2H2 Zn finger 1229..1249 CDD:275368 3/19 (16%)
zf-H2C2_2 1241..1266 CDD:290200 5/47 (11%)
C2H2 Zn finger 1257..1277 CDD:275370 4/42 (10%)
Hus1 1363..1597 CDD:281934 54/261 (21%)
C2H2 Zn finger 1663..1684 CDD:275368 2/6 (33%)
C2H2 Zn finger 1692..1712 CDD:275368
COG5048 1718..>1787 CDD:227381
C2H2 Zn finger 1728..1748 CDD:275368
zf-H2C2_2 1741..1765 CDD:290200
C2H2 Zn finger 1756..1776 CDD:275368
zf-H2C2_2 1768..1793 CDD:290200
C2H2 Zn finger 1784..1802 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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